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X-RAY DIFFRACTION
Materials and Methods page
4BIM
  •   Crystallization Hide
    Crystallization Experiments
    pH 5.5
    Details MES 100 MM, PH 5.5, 50 % V/V MPD
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 207.51 α = 90
    b = 207.51 β = 90
    c = 137.04 γ = 90
     
    Space Group
    Space Group Name:    P 43 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE (RAXIS IV PLUS PLUS)
    Type RIGAKU
    Details OSMIC BLUE
    Collection Date 2011-08-23
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU MICROMAX-007 HF
    Wavelength 1.5418
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.95
    Resolution(Low) 30
    Number Reflections(Observed) 62655
    Percent Possible(Observed) 99.3
    R Merge I(Observed) 0.11
    B(Isotropic) From Wilson Plot 69.19
    Redundancy 4.1
     
    High Resolution Shell Details
    Resolution(High) 2.95
    Resolution(Low) 3.11
    Percent Possible(All) 98.0
    R Merge I(Observed) 0.46
    Mean I Over Sigma(Observed) 2.8
    Redundancy 4.1
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.95
    Resolution(Low) 29.3
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 62443
    Number of Reflections(R-Free) 3166
    Percent Reflections(Observed) 98.76
    R-Factor(Observed) 0.2678
    R-Work 0.2553
    R-Free 0.3044
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 76.5
    Anisotropic B[1][1] -4.3768
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -4.3768
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 8.7535
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.95
    Shell Resolution(Low) 3.03
    Number of Reflections(R-Free) 213
    Number of Reflections(R-Work) 4088
    R-Factor(R-Work) 0.2673
    R-Factor(R-Free) 0.321
    Percent Reflections(Observed) 98.76
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.009
    t_angle_deg 1.11
    t_omega_torsion 2.36
    t_other_torsion 24.56
     
    Coordinate Error
    Luzzati ESD(Observed) 0.677
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 21335
    Nucleic Acid Atoms 0
    Heterogen Atoms 172
    Solvent Atoms 302
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement BUSTER 2.10.0
     
    Software
    refinement BUSTER version: 2.10.0
    model building PHASER