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X-RAY DIFFRACTION
Materials and Methods page
4BCF
  •   Crystallization Hide
    Crystallization Experiments
    pH 6.2
    Details CRYSTALS WERE GROWN AT 4C IN 10-16% PEG 1000, 100MM NAK-PHOSPHATE PH 6.2, 500MM NACL, 4MM TCEP. THEY WERE SUBSEQUENTLY SOAKED IN THE PRESENCE OF THE COMPOUND.
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 172.32 α = 90
    b = 172.32 β = 90
    c = 98.82 γ = 120
     
    Space Group
    Space Group Name:    H 3
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I03
    Wavelength 0.9763
    Site DIAMOND
    Beamline I03
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 3.01
    Resolution(Low) 82.39
    Number Reflections(Observed) 20836
    Percent Possible(Observed) 96.2
    R Merge I(Observed) 0.05
    Redundancy 2.93
     
    High Resolution Shell Details
    Resolution(High) 3.01
    Resolution(Low) 3.17
    Percent Possible(All) 96.6
    R Merge I(Observed) 0.39
    Mean I Over Sigma(Observed) 1.97
    Redundancy 2.94
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method OTHER
    reflnsShellList 3.011
    Resolution(Low) 82.393
    Number of Reflections(Observed) 20826
    Number of Reflections(R-Free) 1053
    Percent Reflections(Observed) 96.212
    R-Factor(Observed) 0.169
    R-Work 0.1665
    R-Free 0.2244
     
    Temperature Factor Modeling
    Mean Isotropic B Value 90.452
    Anisotropic B[1][1] -1.939
    Anisotropic B[1][2] -1.939
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -1.939
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 6.289
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.011
    Shell Resolution(Low) 3.089
    Number of Reflections(R-Free) 70
    Number of Reflections(R-Work) 1464
    R-Factor(R-Work) 0.257
    R-Factor(R-Free) 0.252
    Percent Reflections(Observed) 96.055
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 15.044
    r_scbond_it 16.305
    r_mcangle_it 11.873
    r_mcbond_it 8.505
    r_nbd_refined 0.252
    r_gen_planes_refined 0.008
    r_chiral_restr 0.105
    r_dihedral_angle_4_deg 19.061
    r_dihedral_angle_3_deg 15.742
    r_dihedral_angle_2_deg 35.777
    r_dihedral_angle_1_deg 5.889
    r_angle_refined_deg 1.556
    r_bond_refined_d 0.011
    r_nbtor_refined 0.345
    r_xyhbond_nbd_refined 0.179
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4550
    Nucleic Acid Atoms 0
    Heterogen Atoms 33
    Solvent Atoms 14
     
     
  •   Software and Computing Hide
    Computing
    Structure Solution PHENIX
    Structure Refinement REFMAC 5.7.0029
     
    Software
    refinement REFMAC version: 5.7.0029
    model building PHENIX