X-RAY DIFFRACTION Experimental Data & Validation


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Crystallization

Crystalization Experiments
pH 7
Details pH 7

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 69.72 α = 90
b = 109.85 β = 110.85
c = 70.35 γ = 90
Symmetry
Space Group P 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC TOROIDAL ZERODUR MIRROR 2008-12-12
Diffraction Radiation
Monochromator Protocol
ASYMMETRIC LAUE 001 SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF BEAMLINE ID14-2 -- ESRF ID14-2

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
3.1 42.2 100.0 0.07 -- -- 3.8 -- 18168 -- -3.0 105.85
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
3.09 3.28 100.0 0.99 -- 1.6 3.8 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 3.09 42.15 -- 0.0 -- 18134 918 -- -- 0.1802 0.1784 0.2122 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 3.09 3.28 -- 150 2676 0.2541 0.2979 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 106.37
Anisotropic B[1][1] 11.7651
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -13.9888
Anisotropic B[2][2] -3.7355
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -8.0296
RMS Deviations
Key Refinement Restraint Deviation
t_bond_d 0.01
t_angle_deg 1.01
t_omega_torsion 2.18
t_other_torsion 20.89
Coordinate Error
Parameter Value
Luzzati ESD (Observed) 0.773
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 5703
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 0

Software

Computing
Computing Package Purpose
HKL2000 Data Reduction (intensity integration)
HKL2000 Data Reduction (data scaling)
BUSTER-TNT Structure Solution
BUSTER 2.8.0 Structure Refinement
Software
Software Name Purpose
BUSTER version: 2.8.0 refinement
BUSTER-TNT model building