X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 119.23 α = 90
b = 192.47 β = 90
c = 77.28 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON DIAMOND BEAMLINE I03 -- DIAMOND I03

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.65 71.72 98.8 0.07 -- -- 5.0 -- 200259 -- 2.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.65 1.69 99.6 0.65 -- 2.5 5.2 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.65 71.72 -- -- -- 200259 10593 98.8 -- 0.22246 0.22044 0.25976 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.65 1.693 -- 811 14740 0.282 0.322 -- 99.45
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 22.443
Anisotropic B[1][1] 2.52
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -1.4
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -1.13
RMS Deviations
Key Refinement Restraint Deviation
r_scbond_it 3.461
r_mcangle_it 3.31
r_mcbond_it 2.568
r_gen_planes_refined 0.006
r_chiral_restr 0.088
r_dihedral_angle_4_deg 22.337
r_dihedral_angle_3_deg 14.48
r_dihedral_angle_2_deg 34.411
r_dihedral_angle_1_deg 5.735
r_angle_refined_deg 1.278
r_bond_refined_d 0.008
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 13407
Nucleic Acid Atoms 0
Heterogen Atoms 170
Solvent Atoms 1466

Software

Computing
Computing Package Purpose
MOLREP Structure Solution
REFMAC 5.7.0032 Structure Refinement
Software
Software Name Purpose
REFMAC version: 5.7.0032 refinement
MOLREP model building