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X-RAY DIFFRACTION
Materials and Methods page
4ASO
  •   Crystallization Hide
    Crystallization Experiments
    pH 7.5
    Details BT TUBR-TUBC CRYSTALS WERE PRODUCED IN 500 NL TO 500 NL PROTEIN TO PRECIPITANT DROPS: 10 MG/ML BT TUBR, 500 UM TUBC-24, 100 MM NA-HEPES PH 7.5, 5 MM MGCL2, 25 % (W/V) POLYACRYLIC ACID 5100 SODIUM SALT.
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 519.25 α = 90
    b = 63.66 β = 96.66
    c = 167.26 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL (PILATUS 6M)
    Type DECTRIS
    Collection Date 2011-05-29
     
    Diffraction Radiation
    Monochromator GRAPHITE CRYSTAL
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I03
    Wavelength 0.9794
    Site DIAMOND
    Beamline I03
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 1.3
    Resolution(High) 7
    Resolution(Low) 257.87
    Number Reflections(Observed) 8779
    Percent Possible(Observed) 98.1
    R Merge I(Observed) 0.09
    Redundancy 5.9
     
    High Resolution Shell Details
    Resolution(High) 7.0
    Resolution(Low) 7.38
    Percent Possible(All) 98.5
    R Merge I(Observed) 1.642
    Mean I Over Sigma(Observed) 1.3
    Redundancy 5.9
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 7.0
    Resolution(Low) 64.469
    Cut-off Sigma(F) 1.34
    Number of Reflections(Observed) 8097
    Number of Reflections(R-Free) 431
    Percent Reflections(Observed) 96.75
    R-Factor(Observed) 0.3456
    R-Work 0.3443
    R-Free 0.3712
     
    Temperature Factor Modeling
    Data Not Available
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 7.0001
    Shell Resolution(Low) 7.4381
    Number of Reflections(R-Free) 139
    Number of Reflections(R-Work) 2480
    R-Factor(R-Work) 0.4559
    R-Factor(R-Free) 0.4557
    Percent Reflections(Observed) 95.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 7.4381
    Shell Resolution(Low) 8.0114
    Number of Reflections(R-Free) 188
    Number of Reflections(R-Work) 2590
    R-Factor(R-Work) 0.4046
    R-Factor(R-Free) 0.4316
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 8.0114
    Shell Resolution(Low) 8.8158
    Number of Reflections(R-Free) 131
    Number of Reflections(R-Work) 2566
    R-Factor(R-Work) 0.3347
    R-Factor(R-Free) 0.4279
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 8.8158
    Shell Resolution(Low) 10.0873
    Number of Reflections(R-Free) 122
    Number of Reflections(R-Work) 2623
    R-Factor(R-Work) 0.3491
    R-Factor(R-Free) 0.3366
    Percent Reflections(Observed) 98.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 10.0873
    Shell Resolution(Low) 12.693
    Number of Reflections(R-Free) 138
    Number of Reflections(R-Work) 2627
    R-Factor(R-Work) 0.3411
    R-Factor(R-Free) 0.3398
    Percent Reflections(Observed) 97.0
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 12.693
    Shell Resolution(Low) 64.4712
    Number of Reflections(R-Free) 143
    Number of Reflections(R-Work) 2446
    R-Factor(R-Work) 0.3198
    R-Factor(R-Free) 0.3601
    Percent Reflections(Observed) 94.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    f_plane_restr 0.004
    f_chiral_restr 0.094
    f_dihedral_angle_d 24.368
    f_angle_d 1.449
    f_bond_d 0.014
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 11632
    Nucleic Acid Atoms 3936
    Heterogen Atoms 0
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement PHENIX (PHENIX.REFINE)
     
    Software
    refinement PHENIX version: (PHENIX.REFINE)
    model building PHASER