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X-RAY DIFFRACTION
Materials and Methods page
4A7V
  •   Crystallization Hide
    Crystallization Experiments
    pH 5
    Details 100 MM SODIUM ACETATE, 150 MM SODIUM CHLORIDE, 2.5 M AMMONIUM SULPHATE PH 5
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 38.4 α = 90
    b = 68.04 β = 104.82
    c = 49.85 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC
    Details MIRRORS
    Collection Date 2010-05-10
     
    Diffraction Radiation
    Monochromator SI111
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SOLEIL BEAMLINE PROXIMA 1
    Wavelength 0.98
    Site SOLEIL
    Beamline PROXIMA 1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1
    Resolution(Low) 20
    Number Reflections(Observed) 128603
    Percent Possible(Observed) 96.8
    R Merge I(Observed) 0.05
    B(Isotropic) From Wilson Plot 9.0
    Redundancy 3.7
     
    High Resolution Shell Details
    Resolution(High) 1.0
    Resolution(Low) 1.04
    Percent Possible(All) 80.4
    R Merge I(Observed) 0.59
    Mean I Over Sigma(Observed) 1.6
    Redundancy 2.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method OTHER
    reflnsShellList 1.0
    Resolution(Low) 48.19
    Number of Reflections(Observed) 122450
    Number of Reflections(R-Free) 6491
    Percent Reflections(Observed) 96.72
    R-Factor(Observed) 0.1591
    R-Work 0.15794
    R-Free 0.18083
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 15.176
    Anisotropic B[1][1] -0.02
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] -0.11
    Anisotropic B[2][2] 0.1
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.14
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.0
    Shell Resolution(Low) 1.026
    Number of Reflections(R-Free) 375
    Number of Reflections(R-Work) 7108
    R-Factor(R-Work) 0.271
    R-Factor(R-Free) 0.287
    Percent Reflections(Observed) 76.16
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_sphericity_bonded 10.001
    r_sphericity_free 26.047
    r_rigid_bond_restr 4.916
    r_gen_planes_other 0.005
    r_gen_planes_refined 0.009
    r_chiral_restr 0.105
    r_dihedral_angle_4_deg 13.903
    r_dihedral_angle_3_deg 11.69
    r_dihedral_angle_2_deg 39.006
    r_dihedral_angle_1_deg 7.153
    r_angle_other_deg 2.333
    r_angle_refined_deg 1.728
    r_bond_other_d 0.01
    r_bond_refined_d 0.015
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2218
    Nucleic Acid Atoms 0
    Heterogen Atoms 35
    Solvent Atoms 243
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL2000
    Data Reduction (data scaling) HKL2000
    Structure Solution REFMAC
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117
    model building REFMAC