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X-RAY DIFFRACTION
Materials and Methods page
3ZRM
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 153.08 α = 90
    b = 153.08 β = 90
    c = 200.87 γ = 120
     
    Space Group
    Space Group Name:    H 3 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD (QUANTUM 315R)
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-1
    Wavelength 1.0723
    Site ESRF
    Beamline ID23-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.49
    Resolution(Low) 40
    Number Reflections(Observed) 31863
    Percent Possible(Observed) 100.0
    R Merge I(Observed) 0.1
    Redundancy 7.4
     
    High Resolution Shell Details
    Resolution(High) 2.49
    Resolution(Low) 2.53
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.49
    Mean I Over Sigma(Observed) 5.1
    Redundancy 7.4
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method ISOMORPHOUS REPLACEMENT
    reflnsShellList 2.49
    Resolution(Low) 20.0
    Number of Reflections(Observed) 30492
    Number of Reflections(R-Free) 1296
    Percent Reflections(Observed) 99.92
    R-Factor(Observed) 0.19028
    R-Work 0.18796
    R-Free 0.24658
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 41.067
    Anisotropic B[1][1] -0.32
    Anisotropic B[1][2] -0.16
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.32
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.48
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.49
    Shell Resolution(Low) 2.554
    Number of Reflections(R-Free) 88
    Number of Reflections(R-Work) 2221
    R-Factor(R-Work) 0.225
    R-Factor(R-Free) 0.323
    Percent Reflections(Observed) 99.18
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 4.583
    r_scbond_it 3.079
    r_mcangle_it 2.22
    r_mcbond_it 1.111
    r_nbd_refined 0.201
    r_gen_planes_refined 0.003
    r_chiral_restr 0.076
    r_dihedral_angle_4_deg 22.43
    r_dihedral_angle_3_deg 16.847
    r_dihedral_angle_2_deg 34.648
    r_dihedral_angle_1_deg 5.554
    r_angle_refined_deg 1.203
    r_bond_refined_d 0.009
    r_nbtor_refined 0.307
    r_xyhbond_nbd_refined 0.13
    r_symmetry_vdw_refined 0.224
    r_symmetry_hbond_refined 0.15
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5902
    Nucleic Acid Atoms 0
    Heterogen Atoms 88
    Solvent Atoms 183
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (data scaling) SCALEPACK
    Structure Refinement REFMAC 5.3.0006
     
    Software
    refinement REFMAC version: 5.3.0006