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X-RAY DIFFRACTION
Materials and Methods page
3ZRL
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 153.23 α = 90
    b = 153.23 β = 90
    c = 201.73 γ = 120
     
    Space Group
    Space Group Name:    H 3 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD (QUANTUM 315R)
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-1
    Wavelength 1.0723
    Site ESRF
    Beamline ID23-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.48
    Resolution(Low) 40
    Number Reflections(Observed) 31542
    Percent Possible(Observed) 97.4
    R Merge I(Observed) 0.08
    Redundancy 7.1
     
    High Resolution Shell Details
    Resolution(High) 2.48
    Resolution(Low) 2.52
    Percent Possible(All) 99.2
    R Merge I(Observed) 0.43
    Mean I Over Sigma(Observed) 4.92
    Redundancy 6.6
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method ISOMORPHOUS REPLACEMENT
    reflnsShellList 2.48
    Resolution(Low) 20.0
    Number of Reflections(Observed) 30190
    Number of Reflections(R-Free) 1286
    Percent Reflections(Observed) 97.33
    R-Factor(Observed) 0.18789
    R-Work 0.18532
    R-Free 0.24916
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 46.037
    Anisotropic B[1][1] -0.57
    Anisotropic B[1][2] -0.29
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.57
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.86
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.481
    Shell Resolution(Low) 2.545
    Number of Reflections(R-Free) 100
    Number of Reflections(R-Work) 2188
    R-Factor(R-Work) 0.217
    R-Factor(R-Free) 0.311
    Percent Reflections(Observed) 97.69
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 4.966
    r_scbond_it 3.603
    r_mcangle_it 2.377
    r_mcbond_it 1.184
    r_nbd_refined 0.201
    r_gen_planes_refined 0.004
    r_chiral_restr 0.083
    r_dihedral_angle_4_deg 22.344
    r_dihedral_angle_3_deg 16.84
    r_dihedral_angle_2_deg 34.921
    r_dihedral_angle_1_deg 5.71
    r_angle_refined_deg 1.289
    r_bond_refined_d 0.01
    r_nbtor_refined 0.306
    r_xyhbond_nbd_refined 0.134
    r_symmetry_vdw_refined 0.217
    r_symmetry_hbond_refined 0.167
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5905
    Nucleic Acid Atoms 0
    Heterogen Atoms 82
    Solvent Atoms 198
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.3.0006
     
    Software
    refinement REFMAC version: 5.3.0006