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X-RAY DIFFRACTION
Materials and Methods page
3ZM9
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 55.75 α = 90
    b = 121.21 β = 90
    c = 131.86 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 73
     
    Diffraction Detector
    Detector CCD
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I03
    Wavelength 0.978
    Site DIAMOND
    Beamline I03
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 2.0
    Resolution(High) 1.9
    Resolution(Low) 20
    Number Reflections(Observed) 69213
    Percent Possible(Observed) 97.2
    R Merge I(Observed) 0.1
    Redundancy 5.9
     
    High Resolution Shell Details
    Resolution(High) 1.9
    Resolution(Low) 2.0
    Percent Possible(All) 83.9
    R Merge I(Observed) 0.6
    Mean I Over Sigma(Observed) 2.3
    Redundancy 3.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.9
    Resolution(Low) 131.86
    Number of Reflections(Observed) 67403
    Number of Reflections(R-Free) 1722
    Percent Reflections(Observed) 97.02
    R-Factor(Observed) 0.20199
    R-Work 0.2013
    R-Free 0.22873
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 35.097
    Anisotropic B[1][1] -0.84
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 1.91
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -1.07
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.9
    Shell Resolution(Low) 1.949
    Number of Reflections(R-Free) 108
    Number of Reflections(R-Work) 3805
    R-Factor(R-Work) 0.263
    R-Factor(R-Free) 0.304
    Percent Reflections(Observed) 78.24
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.005
    r_chiral_restr 0.091
    r_dihedral_angle_4_deg 16.185
    r_dihedral_angle_3_deg 15.785
    r_dihedral_angle_2_deg 35.46
    r_dihedral_angle_1_deg 5.351
    r_angle_refined_deg 1.234
    r_bond_refined_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5813
    Nucleic Acid Atoms 0
    Heterogen Atoms 74
    Solvent Atoms 380
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) SCALEPACK
    Structure Solution MOLREP
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117
    model building MOLREP