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X-RAY DIFFRACTION
Materials and Methods page
3ZLY
  •   Crystallization Hide
    Crystallization Experiments
    pH 7.7
    Details pH 7.7
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 76.76 α = 90
    b = 76.76 β = 90
    c = 221.77 γ = 120
     
    Space Group
    Space Group Name:    P 61 2 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Collection Date 2011-04-05
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF
    Wavelength 0.9795
    Site ESRF
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 2.0
    Resolution(High) 2.11
    Resolution(Low) 66.48
    Number Reflections(Observed) 23057
    Percent Possible(Observed) 99.4
    R Merge I(Observed) 0.08
    B(Isotropic) From Wilson Plot 48.09
    Redundancy 4.8
     
    High Resolution Shell Details
    Resolution(High) 2.11
    Resolution(Low) 2.2
    Percent Possible(All) 99.7
    R Merge I(Observed) 0.48
    Mean I Over Sigma(Observed) 3.3
    Redundancy 4.5
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.11
    Resolution(Low) 66.48
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 23057
    Number of Reflections(R-Free) 1182
    Percent Reflections(Observed) 99.38
    R-Factor(Observed) 0.201
    R-Work 0.1986
    R-Free 0.2477
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 54.25
    Anisotropic B[1][1] 0.0776
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.0776
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.1552
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.11
    Shell Resolution(Low) 2.2
    Number of Reflections(R-Free) 129
    Number of Reflections(R-Work) 2512
    R-Factor(R-Work) 0.2198
    R-Factor(R-Free) 0.2641
    Percent Reflections(Observed) 99.38
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.01
    t_angle_deg 1.04
    t_omega_torsion 3.23
    t_other_torsion 17.76
     
    Coordinate Error
    Luzzati ESD(Observed) 0.279
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2421
    Nucleic Acid Atoms 0
    Heterogen Atoms 13
    Solvent Atoms 102
     
     
  •   Software and Computing Hide
    Computing
    Structure Solution PHASER
    Structure Refinement BUSTER 2.11.4
     
    Software
    refinement BUSTER version: 2.11.4
    model building PHASER