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X-RAY DIFFRACTION
Materials and Methods page
3ZHP
  •   Crystallization Hide
    Crystallization Experiments
    pH 7.5
    Details 0.2M NA/KPO4, 10% PEG 3350, 10% ETHYLENE GLYCOL, pH 7.5
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 64.8 α = 90
    b = 120.34 β = 99.69
    c = 98.91 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Collection Date 2011-12-07
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type DIAMOND BEAMLINE I04-1
    Wavelength 0.9173
    Site DIAMOND
    Beamline I04-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.9
    Resolution(Low) 63.88
    Number Reflections(Observed) 32108
    Percent Possible(Observed) 96.8
    R Merge I(Observed) 0.07
    B(Isotropic) From Wilson Plot 69.6
    Redundancy 4.3
     
    High Resolution Shell Details
    Resolution(High) 2.9
    Resolution(Low) 3.06
    Percent Possible(All) 97.3
    R Merge I(Observed) 0.78
    Mean I Over Sigma(Observed) 1.7
    Redundancy 4.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.9
    Resolution(Low) 51.88
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 32082
    Number of Reflections(R-Free) 1627
    Percent Reflections(Observed) 96.54
    R-Factor(Observed) 0.2284
    R-Work 0.2267
    R-Free 0.2612
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 124.97
    Anisotropic B[1][1] -0.8757
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] -28.3452
    Anisotropic B[2][2] -15.1949
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 16.0706
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.9
    Shell Resolution(Low) 3.0
    Number of Reflections(R-Free) 141
    Number of Reflections(R-Work) 2834
    R-Factor(R-Work) 0.2987
    R-Factor(R-Free) 0.2912
    Percent Reflections(Observed) 96.54
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.009
    t_angle_deg 0.99
    t_omega_torsion 2.0
    t_other_torsion 2.92
     
    Coordinate Error
    Luzzati ESD(Observed) 0.771
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 8787
    Nucleic Acid Atoms 0
    Heterogen Atoms 20
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement BUSTER 2.11.2
     
    Software
    refinement BUSTER version: 2.11.2
    model building PHASER