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X-RAY DIFFRACTION
Materials and Methods page
3ZHA
  •   Crystallization Hide
    Crystallization Experiments
    pH 7
    Details pH 7
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 102.71 α = 90
    b = 104.9 β = 103.71
    c = 171.84 γ = 90
     
    Space Group
    Space Group Name:    P 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL (PILATUS)
    Type DECTRIS
    Details MIRRORS
    Collection Date 2012-06-06
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SLS BEAMLINE X06DA
    Wavelength 1.00
    Site SLS
    Beamline X06DA
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) -3.0
    Resolution(High) 2.55
    Resolution(Low) 50
    Number Reflections(Observed) 113422
    Percent Possible(Observed) 98.1
    R Merge I(Observed) 0.1
    B(Isotropic) From Wilson Plot 51.12
    Redundancy 2.3
     
    High Resolution Shell Details
    Resolution(High) 2.55
    Resolution(Low) 2.62
    Percent Possible(All) 94.3
    R Merge I(Observed) 1.08
    Mean I Over Sigma(Observed) 0.94
    Redundancy 2.1
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.55
    Resolution(Low) 49.16
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 113420
    Number of Reflections(R-Free) 1780
    Percent Reflections(Observed) 98.03
    R-Factor(Observed) 0.1956
    R-Work 0.1952
    R-Free 0.2176
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 58.47
    Anisotropic B[1][1] -0.1093
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0861
    Anisotropic B[2][2] 6.2526
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -6.1433
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.55
    Shell Resolution(Low) 2.62
    Number of Reflections(R-Free) 132
    Number of Reflections(R-Work) 7797
    R-Factor(R-Work) 0.2414
    R-Factor(R-Free) 0.241
    Percent Reflections(Observed) 98.03
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.009
    t_angle_deg 1.14
    t_omega_torsion 2.94
    t_other_torsion 18.01
     
    Coordinate Error
    Luzzati ESD(Observed) 0.387
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 24641
    Nucleic Acid Atoms 0
    Heterogen Atoms 40
    Solvent Atoms 222
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XSCALE
    Structure Solution PHASER
    Structure Refinement BUSTER 2.10.0
     
    Software
    refinement BUSTER version: 2.10.0
    model building PHASER