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X-RAY DIFFRACTION
Materials and Methods page
3ZGW
  •   Crystallization Hide
    Crystallization Experiments
    Details 10% PEG 3350, 0.1M BIS-TRIS PH 6.5, 0.2M SODIUM CHLORIDE
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 60.02 α = 90
    b = 63.81 β = 90
    c = 92.05 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL (PILATUS 6M)
    Type DECTRIS
    Collection Date 2010-11-29
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID29
    Wavelength 0.9763
    Site ESRF
    Beamline ID29
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.6
    Resolution(Low) 63.81
    Number Reflections(Observed) 11375
    Percent Possible(Observed) 99.9
    R Merge I(Observed) 0.13
    Redundancy 5.5
     
    High Resolution Shell Details
    Resolution(High) 2.6
    Resolution(Low) 2.74
    Percent Possible(All) 99.7
    R Merge I(Observed) 0.72
    Mean I Over Sigma(Observed) 2.0
    Redundancy 4.9
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.6
    Resolution(Low) 52.44
    Number of Reflections(Observed) 10793
    Number of Reflections(R-Free) 542
    Percent Reflections(Observed) 99.77
    R-Factor(Observed) 0.1835
    R-Work 0.17952
    R-Free 0.26038
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 48.808
    Anisotropic B[1][1] -2.34
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.8
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 3.14
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.6
    Shell Resolution(Low) 2.667
    Number of Reflections(R-Free) 48
    Number of Reflections(R-Work) 766
    R-Factor(R-Work) 0.27
    R-Factor(R-Free) 0.39
    Percent Reflections(Observed) 99.51
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_refined 0.013
    r_chiral_restr 0.154
    r_dihedral_angle_4_deg 19.449
    r_dihedral_angle_3_deg 20.731
    r_dihedral_angle_2_deg 35.954
    r_dihedral_angle_1_deg 8.239
    r_angle_refined_deg 2.677
    r_bond_refined_d 0.025
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2555
    Nucleic Acid Atoms 0
    Heterogen Atoms 31
    Solvent Atoms 47
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) IMOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117
    model building PHASER