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X-RAY DIFFRACTION
Materials and Methods page
3ZF5
  •   Crystallization Hide
    Crystallization Experiments
    Details 2-8% TERT-BUTANOL, 0.1M TRIS (PH 8.5), 30-50% MPD PR PEG400.
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 88.24 α = 90
    b = 88.24 β = 90
    c = 88.24 γ = 90
     
    Space Group
    Space Group Name:    P 21 3
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 110
     
    Diffraction Detector
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Wavelength 1.54
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 2.0
    Resolution(High) 3
    Resolution(Low) 14.9
    Number Reflections(Observed) 4719
    Percent Possible(Observed) 98.5
    R Merge I(Observed) 0.17
    Redundancy 4.4
     
    High Resolution Shell Details
    Resolution(High) 3.0
    Resolution(Low) 3.16
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.35
    Mean I Over Sigma(Observed) 2.3
    Redundancy 4.4
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 3.2
    Resolution(Low) 14.71
    Number of Reflections(Observed) 3391
    Number of Reflections(R-Free) 150
    Percent Reflections(Observed) 89.53
    R-Factor(Observed) 0.22421
    R-Work 0.22189
    R-Free 0.27663
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 29.684
    Anisotropic B[1][1] 13.46
    Anisotropic B[1][2] -0.24
    Anisotropic B[1][3] -26.9
    Anisotropic B[2][2] -8.92
    Anisotropic B[2][3] -0.18
    Anisotropic B[3][3] -4.54
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.201
    Shell Resolution(Low) 3.284
    Number of Reflections(R-Free) 16
    Number of Reflections(R-Work) 265
    R-Factor(R-Work) 0.306
    R-Factor(R-Free) 0.437
    Percent Reflections(Observed) 98.25
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scbond_it 0.111
    r_mcangle_it 0.624
    r_mcbond_it 0.329
    r_gen_planes_refined 0.003
    r_chiral_restr 0.052
    r_dihedral_angle_4_deg 17.058
    r_dihedral_angle_3_deg 13.211
    r_dihedral_angle_2_deg 28.859
    r_dihedral_angle_1_deg 4.115
    r_angle_refined_deg 0.858
    r_bond_refined_d 0.004
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1304
    Nucleic Acid Atoms 0
    Heterogen Atoms 31
    Solvent Atoms 31
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) IMOSFLM
    Data Reduction (data scaling) SCALA
    Structure Refinement REFMAC 5.7.0032
     
    Software
    refinement REFMAC version: 5.7.0032