X-RAY DIFFRACTION Experimental Data & Validation


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Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 87.18 α = 90
b = 87.18 β = 90
c = 87.18 γ = 90
Symmetry
Space Group P 21 3

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON DIAMOND BEAMLINE I04-1 -- DIAMOND I04-1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
3.1 61.7 99.9 0.08 -- -- 5.0 -- 4199 -- 2.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
3.1 3.27 100.0 0.3 -- 2.6 5.2 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 3.1 61.65 -- -- -- 3661 517 99.79 -- 0.23822 0.23242 0.27781 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 3.103 3.184 -- 28 273 0.308 0.306 -- 100.0
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 127.836
Anisotropic B[1][2] 49.4
Anisotropic B[2][2] -64.26
RMS Deviations
Key Refinement Restraint Deviation
r_scbond_it 1.588
r_mcangle_it 3.28
r_mcbond_it 1.898
r_gen_planes_refined 0.004
r_chiral_restr 0.05
r_dihedral_angle_4_deg 10.622
r_dihedral_angle_3_deg 12.873
r_dihedral_angle_2_deg 29.082
r_dihedral_angle_1_deg 3.798
r_angle_refined_deg 0.783
r_bond_refined_d 0.004
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1230
Nucleic Acid Atoms 0
Heterogen Atoms 2
Solvent Atoms 26

Software

Computing
Computing Package Purpose
REFMAC 5.7.0032 Structure Refinement
Software
Software Name Purpose
REFMAC version: 5.7.0032 refinement