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X-RAY DIFFRACTION
Materials and Methods page
3ZBD
  •   Crystallization Hide
    Crystallization Experiments
    Details 5%(V/VOL) PEG 4000, 200MM AMMONIUM CHLORIDE, 30MM HEPES, 30MM MES, PH 6.2
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 35.64 α = 91.49
    b = 36.09 β = 108.85
    c = 42.27 γ = 94.2
     
    Space Group
    Space Group Name:    P 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 110
    Diffrn ID 2
    Data Collection Temperature 110
     
    Diffraction Detector
    Detector CCD
    Type MARRESEARCH
    Detector CCD
    Type MARRESEARCH
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID14-4
    Wavelength 1.072
    Site ESRF
    Beamline ID14-4
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-2
    Wavelength 0.873
    Site ESRF
    Beamline ID23-2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 1.5
    Resolution(High) 1.5
    Resolution(Low) 27.4
    Number Reflections(Observed) 30811
    Percent Possible(Observed) 96.6
    R Merge I(Observed) 0.06
    B(Isotropic) From Wilson Plot 17.72
    Redundancy 4.0
     
    High Resolution Shell Details
    Resolution(High) 1.5
    Resolution(Low) 1.58
    Percent Possible(All) 95.4
    R Merge I(Observed) 0.48
    Mean I Over Sigma(Observed) 3.0
    Redundancy 3.9
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method SIRAS
    reflnsShellList 1.49
    Resolution(Low) 26.05
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 31262
    Number of Reflections(R-Free) 1535
    Percent Reflections(Observed) 96.38
    R-Factor(Observed) 0.1763
    R-Work 0.1747
    R-Free 0.2089
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 23.26
    Anisotropic B[1][1] 0.7484
    Anisotropic B[1][2] 0.2673
    Anisotropic B[1][3] 1.786
    Anisotropic B[2][2] 1.4061
    Anisotropic B[2][3] -1.9738
    Anisotropic B[3][3] -2.1545
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.49
    Shell Resolution(Low) 1.54
    Number of Reflections(R-Free) 132
    Number of Reflections(R-Work) 2562
    R-Factor(R-Work) 0.2056
    R-Factor(R-Free) 0.2471
    Percent Reflections(Observed) 96.38
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.01
    t_angle_deg 1.06
    t_omega_torsion 4.68
    t_other_torsion 15.16
     
    Coordinate Error
    Luzzati ESD(Observed) 0.181
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1718
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 207
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Refinement BUSTER 2.10.0
     
    Software
    refinement BUSTER version: 2.10.0