POP-OUT | CLOSE
 
X-RAY DIFFRACTION
Materials and Methods page
3W14
  •   Crystallization Hide
    Crystallization Experiments
    pH 7.5
    Details 9% POLYETHYLENE GLYCOL 3350, 200MM PROLINE, 100MM HEPES/NAOH, pH 7.5
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 118.15 α = 90
    b = 140.1 β = 95.04
    c = 190.02 γ = 90
     
    Space Group
    Space Group Name:    I 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC
    Collection Date 2011-02-18
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type AUSTRALIAN SYNCHROTRON BEAMLINE MX2
    Wavelength 0.953691
    Site AUSTRALIAN SYNCHROTRON
    Beamline MX2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) -3.0
    Resolution(High) 4.4
    Resolution(Low) 42.49
    Number Reflections(Observed) 17344
    Percent Possible(Observed) 87.7
    R Merge I(Observed) 0.206
    B(Isotropic) From Wilson Plot 182.16
    Redundancy 2.9
     
    High Resolution Shell Details
    Resolution(High) 4.4
    Resolution(Low) 4.5
    Percent Possible(All) 84.9
    R Merge I(Observed) 1.31
    Mean I Over Sigma(Observed) 0.78
    Redundancy 2.8
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 4.4
    Resolution(Low) 42.49
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 17331
    Number of Reflections(R-Free) 886
    Percent Reflections(Observed) 88.06
    R-Factor(Observed) 0.2458
    R-Work 0.2449
    R-Free 0.262
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 230.843
    Anisotropic B[1][1] -6.2918
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 23.1615
    Anisotropic B[2][2] 33.4212
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -27.1293
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 4.4
    Shell Resolution(Low) 4.67
    Number of Reflections(R-Free) 141
    Number of Reflections(R-Work) 2626
    R-Factor(R-Work) 0.2304
    R-Factor(R-Free) 0.2641
    Percent Reflections(Observed) 88.06
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_other_torsion 21.91
    t_omega_torsion 4.12
    t_angle_deg 1.41
    t_bond_d 0.01
     
    Coordinate Error
    Luzzati ESD(Observed) 1.582
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 16158
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XSCALE
    Structure Solution PHASER
    Structure Refinement BUSTER 2.10.0
     
    Software
    data extraction pdb_extract version: 3.11
    refinement BUSTER-TNT version: BUSTER 2.10.0
    data reduction Xscale