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X-RAY DIFFRACTION
Materials and Methods page
3V13
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7
    Temperature 293.0
    Details 20% PEG8000, 0.2M AMMONIUM SULPHATE, 0.1M IMIDAZOLE, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 81.81 α = 90
    b = 81.81 β = 90
    c = 63.87 γ = 120
     
    Space Group
    Space Group Name:    P 65
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type RIGAKU SATURN 944+
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU
    Wavelength List 1.542
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) -3.7
    Resolution(High) 1.63
    Resolution(Low) 70.89
    Number Reflections(All) 30439
    Number Reflections(Observed) 30439
    Percent Possible(Observed) 100.0
    R Merge I(Observed) 0.118
    Redundancy 8.9
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.63
    Resolution(Low) 70.89
    Number of Reflections(all) 30409
    Number of Reflections(Observed) 30409
    Number of Reflections(R-Free) 1538
    Percent Reflections(Observed) 99.97
    R-Factor(All) 0.14784
    R-Factor(Observed) 0.14784
    R-Work 0.14563
    R-Free 0.17539
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Isotropic Thermal Model Isotropic
    Mean Isotropic B Value 14.917
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 2.659
    r_scbond_it 1.743
    r_mcangle_it 1.142
    r_mcbond_it 0.678
    r_gen_planes_refined 0.008
    r_chiral_restr 0.092
    r_dihedral_angle_4_deg 12.722
    r_dihedral_angle_3_deg 11.61
    r_dihedral_angle_2_deg 36.892
    r_dihedral_angle_1_deg 6.543
    r_angle_refined_deg 1.489
    r_bond_refined_d 0.016
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1641
    Nucleic Acid Atoms 0
    Heterogen Atoms 61
    Solvent Atoms 401
     
     
  •   Software and Computing Hide
    Computing
    Data Collection CrystalClear
    Data Reduction (intensity integration) d*TREK
    Data Reduction (data scaling) d*TREK
    Structure Solution PHASER
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109
    model building PHASER
    data collection CrystalClear