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X-RAY DIFFRACTION
Materials and Methods page
3V0W
  •   Crystallization Hide
    Crystallization Experiments
    Method hanging drop
    pH 4.6
    Temperature 289.0
    Details Sodium acetate, Ammonium sulfate, pH 4.6, hanging drop, temperature 289K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 101.85 α = 90
    b = 101.85 β = 90
    c = 118.53 γ = 90
     
    Space Group
    Space Group Name:    P 43 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type RAYONIX MX-300
    Details Vertical focussing mirrors
    Collection Date 2011-05-17
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type CLSI BEAMLINE 08ID-1
    Wavelength List 0.98
    Site CLSI
    Beamline 08ID-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.72
    Resolution(Low) 30
    Number Reflections(Observed) 65161
    Percent Possible(Observed) 97.9
    R Merge I(Observed) 0.047
    Redundancy 5.3
     
    High Resolution Shell Details
    Resolution(High) 1.72
    Resolution(Low) 1.78
    Percent Possible(All) 85.1
    R Merge I(Observed) 0.256
    Redundancy 4.3
     
     
  •   Refinement Hide
    Refinement Statistics
    reflnsShellList 1.73
    Resolution(Low) 30.0
    Number of Reflections(Observed) 61638
    Number of Reflections(R-Free) 3288
    Percent Reflections(Observed) 98.7
    R-Factor(Observed) 0.184
    R-Work 0.182
    R-Free 0.231
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 25.01
    Anisotropic B[1][1] -0.3
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.3
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.61
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.728
    Shell Resolution(Low) 1.773
    Number of Reflections(R-Free) 234
    Number of Reflections(R-Work) 4366
    R-Factor(R-Work) 0.218
    R-Factor(R-Free) 0.278
    Percent Reflections(Observed) 96.15
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 3244
    Nucleic Acid Atoms 0
    Heterogen Atoms 183
    Solvent Atoms 526
     
     
  •   Software and Computing Hide
    Computing
    Data Collection MxDC
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution Phaser
    Structure Refinement REFMAC
     
    Software
    data extraction pdb_extract version: 3.10
    refinement REFMAC5 version: 5.5.0109
    data reduction HKL