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X-RAY DIFFRACTION
Materials and Methods page
3UOI
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 8
    Temperature 298.0
    Details 1.7 M NaCl and 100 mM Tris-HCl (pH 8.0), VAPOR DIFFUSION, HANGING DROP, temperature 298K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 122.96 α = 89.95
    b = 123.22 β = 89.95
    c = 175.45 γ = 90
     
    Space Group
    Space Group Name:    P 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector AREA DETECTOR
    Type ADSC QUANTUM 315
     
    Diffraction Radiation
    Monochromator Double crystal
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SSRL BEAMLINE BL9-2
    Wavelength List 0.9795
    Site SSRL
    Beamline BL9-2
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.9
    Resolution(Low) 50
    Percent Possible(Observed) 89.4
    Redundancy 3.6
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.9
    Resolution(Low) 32.56
    Number of Reflections(Observed) 682257
    Number of Reflections(R-Free) 35900
    Percent Reflections(Observed) 88.36
    R-Factor(Observed) 0.15055
    R-Work 0.14825
    R-Free 0.19442
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 25.078
    Anisotropic B[1][1] 2.34
    Anisotropic B[1][2] -2.83
    Anisotropic B[1][3] -10.7
    Anisotropic B[2][2] -1.42
    Anisotropic B[2][3] 1.9
    Anisotropic B[3][3] -0.92
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.899
    Shell Resolution(Low) 1.948
    Number of Reflections(R-Free) 2085
    Number of Reflections(R-Work) 41230
    R-Factor(R-Work) 0.205
    R-Factor(R-Free) 0.307
    Percent Reflections(Observed) 71.97
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 6.005
    r_scbond_it 4.26
    r_mcangle_it 2.275
    r_mcbond_it 1.526
    r_gen_planes_refined 0.013
    r_chiral_restr 0.18
    r_dihedral_angle_4_deg 19.275
    r_dihedral_angle_3_deg 17.23
    r_dihedral_angle_2_deg 39.973
    r_dihedral_angle_1_deg 7.178
    r_angle_refined_deg 2.595
    r_bond_refined_d 0.03
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 61672
    Nucleic Acid Atoms 0
    Heterogen Atoms 1032
    Solvent Atoms 4856
     
     
  •   Software and Computing Hide
    Computing
    Data Collection ADSC Quantum
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109
    data collection ADSC version: Quantum