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X-RAY DIFFRACTION
Materials and Methods page
3U0W
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 5.5
    Temperature 293.0
    Details 100mM citric acid, 20%(v/v) 2-propanol, 20%(w/v) PEG 4000, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 64.05 α = 90
    b = 81.29 β = 90
    c = 108.47 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 210r
    Collection Date 2010-02-25
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type AUSTRALIAN SYNCHROTRON BEAMLINE MX1
    Wavelength List 0.95466
    Site AUSTRALIAN SYNCHROTRON
    Beamline MX1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2
    Resolution(Low) 41.39
    Number Reflections(All) 39134
    Number Reflections(Observed) 39134
    Percent Possible(Observed) 95.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.0
    Resolution(Low) 41.39
    Number of Reflections(Observed) 35425
    Number of Reflections(R-Free) 1877
    Percent Reflections(Observed) 95.3
    R-Factor(Observed) 0.19145
    R-Work 0.1891
    R-Free 0.23543
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Isotropic Thermal Model Isotropic
    Mean Isotropic B Value 26.965
    Anisotropic B[1][1] 0.0
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.0
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.0
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.997
    Shell Resolution(Low) 2.049
    Number of Reflections(R-Free) 87
    Number of Reflections(R-Work) 1738
    R-Factor(R-Work) 0.309
    R-Factor(R-Free) 0.408
    Percent Reflections(Observed) 65.6
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_gen_planes_other 0.001
    r_gen_planes_refined 0.01
    r_chiral_restr 0.129
    r_dihedral_angle_4_deg 20.276
    r_dihedral_angle_3_deg 14.767
    r_dihedral_angle_2_deg 35.542
    r_dihedral_angle_1_deg 7.68
    r_angle_other_deg 1.17
    r_angle_refined_deg 2.004
    r_bond_other_d 0.022
    r_bond_refined_d 0.021
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 3204
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 304
     
     
  •   Software and Computing Hide
    Computing
    Data Collection BLUE-ICE
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) SCALEPACK
    Structure Solution PHASER
    Structure Refinement REFMAC 5.6.0117
     
    Software
    refinement REFMAC version: 5.6.0117
    model building PHASER
    data collection BLUE-ICE