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X-RAY DIFFRACTION
Materials and Methods page
3RSV
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.6
    Temperature 293.0
    Details 20% (w/v) PEG 5000 monomethylethyl ether (MME), 200mM sodium citrate (pH 6.6) and 200mM sodium iodide, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 103.42 α = 90
    b = 103.42 β = 90
    c = 169.54 γ = 120
     
    Space Group
    Space Group Name:    P 61 2 2
     
     
  •   Diffraction Hide
    Diffraction Detector
    Collection Date 2010-10-18
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ALS BEAMLINE 5.0.2
    Wavelength List 1
    Site ALS
    Beamline 5.0.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 2.5
    Resolution(Low) 20
    Number Reflections(All) 18181
    Number Reflections(Observed) 18046
    Percent Possible(Observed) 99.25
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.5
    Resolution(Low) 20.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 18181
    Number of Reflections(Observed) 18046
    Number of Reflections(R-Free) 979
    Percent Reflections(Observed) 99.26
    R-Factor(All) 0.2199
    R-Factor(Observed) 0.2199
    R-Work 0.21829
    R-Free 0.25029
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 33.094
    Anisotropic B[1][1] 0.56
    Anisotropic B[1][2] 0.28
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.56
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.84
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.5
    Shell Resolution(Low) 2.568
    Number of Reflections(R-Free) 78
    Number of Reflections(R-Work) 1301
    R-Factor(R-Work) 0.257
    R-Factor(R-Free) 0.297
    Percent Reflections(Observed) 99.64
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 2.189
    r_scbond_it 1.26
    r_mcangle_it 1.194
    r_mcbond_it 0.642
    r_gen_planes_refined 0.005
    r_chiral_restr 0.072
    r_dihedral_angle_4_deg 14.128
    r_dihedral_angle_3_deg 14.621
    r_dihedral_angle_2_deg 34.267
    r_dihedral_angle_1_deg 6.503
    r_angle_refined_deg 1.152
    r_bond_refined_d 0.009
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2873
    Nucleic Acid Atoms 0
    Heterogen Atoms 54
    Solvent Atoms 122
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Refinement REFMAC 5.5.0109
     
    Software
    refinement REFMAC version: 5.5.0109
    data collection HKL-2000