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ELECTRON MICROSCOPY
Materials and Methods page
3J2G
  •   EM Refinement Details Hide
    3D Reconstruction
    Software Package(s) Spider
    Reconstruction Method Reference Projections
     
    EM Map-Model Fitting & Refinement
    Refinement Space REAL
    Refinement Protocol Initial local fitting was done using Chimera and then MDFF was used for flexible fitting
    Refinement Target Cross-correlation
     
    EM Image Reconstruction Statistics
    Effective Resolution 16.5
    CTF Correction Method Weiner filter
    Other Details Details about the particle: This is a classification volume (No. 4) using ML3D methods.
     
    Electron Microscope Sample
    Sample pH 7.5
    Sample Aggregation State PARTICLE
    Name of Sample immature ribosomal small subunit from rimm gene deleted E.coli strain treated with RimM in vitro
     
    Data Acquisition
    Date of Experiment 01-JAN-2012
    Microscope Model FEI TITAN KRIOS
    Detector Type FEI Eagle 4k*4k CCD
    Minimum Defocus (NM) 1500.0
    Maximum Defocus (NM) 3800.0
    Minimum Tilt Angle (degrees) 0.0
    Maximum Tilt Angle (degrees) 0.0
    Imaging Mode BRIGHT FIELD
    Electron Dose (electrons nm**-2) 20.0
    Illumination Mode FLOOD BEAM
    Nominal Magnification 59000
    Source FIELD EMISSION GUN
    Acceleration Voltage (KV) 300
     
    Biomolecule
    COM ID 1
    Name small subunit from rimm gene deleted E.coli strain
    Type RIBOSOME