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X-RAY DIFFRACTION
Materials and Methods page
3GC5
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 5.5
    Temperature 288.0
    Details 100mM TRIS HCl, 1mM DTT, 10% DMSO, 5% PEG 8000, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 90.2 α = 90
    b = 65 β = 96.2
    c = 70.8 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type RAYONIX MX225HE
    Details Mirror
    Collection Date 2009-02-06
     
    Diffraction Radiation
    Monochromator Double Crystal Monochromator
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type BESSY BEAMLINE 14.1
    Wavelength List 0.91841
    Site BESSY
    Beamline 14.1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.4
    Resolution(Low) 30
    Number Reflections(All) 79791
    Number Reflections(Observed) 79791
    Percent Possible(Observed) 99.4
    Redundancy 3.8
     
    High Resolution Shell Details
    Resolution(High) 1.4
    Resolution(Low) 1.42
    Percent Possible(All) 94.6
    Mean I Over Sigma(Observed) 3.3
    R-Sym I(Observed) 0.307
    Redundancy 3.5
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method FOURIER SYNTHESIS
    reflnsShellList 1.4
    Resolution(Low) 10.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 76625
    Number of Reflections(Observed) 76625
    Number of Reflections(R-Free) 3862
    Percent Reflections(Observed) 95.6
    R-Factor(All) 0.1632
    R-Factor(Observed) 0.1618
    R-Free 0.1921
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.0
    s_similar_adp_cmpnt 0.059
    s_rigid_bond_adp_cmpnt 0.0
    s_anti_bump_dis_restr 0.027
    s_non_zero_chiral_vol 0.073
    s_zero_chiral_vol 0.066
    s_from_restr_planes 0.0267
    s_similar_dist 0.0
    s_angle_d 0.029
    s_bond_d 0.011
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2821
    Nucleic Acid Atoms 0
    Heterogen Atoms 39
    Solvent Atoms 284
     
     
  •   Software and Computing Hide
    Computing
    Data Collection mxCuBE
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution CNS
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building CNS
    data collection mxCuBE