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X-RAY DIFFRACTION
Materials and Methods page
3GC4
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 5.5
    Temperature 288.0
    Details 100mM TRIS HCl, 1mM DTT, 10% DMSO, 5% PEG 8000, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 90.5 α = 90
    b = 64.9 β = 96
    c = 70.4 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Type RIGAKU RAXIS IV
    Details mirror
    Collection Date 2008-01-09
     
    Diffraction Radiation
    Monochromator Yale Mirror
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU RU300
    Wavelength List 1.5418
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.8
    Resolution(Low) 30
    Number Reflections(All) 36099
    Number Reflections(Observed) 36099
    Percent Possible(Observed) 95.6
    Redundancy 3.8
     
    High Resolution Shell Details
    Resolution(High) 1.8
    Resolution(Low) 1.83
    Percent Possible(All) 65.6
    Mean I Over Sigma(Observed) 2.8
    R-Sym I(Observed) 0.25
    Redundancy 1.9
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method AB INITIO
    reflnsShellList 1.8
    Resolution(Low) 10.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 34502
    Number of Reflections(Observed) 34502
    Number of Reflections(R-Free) 1713
    Percent Reflections(Observed) 91.9
    R-Factor(All) 0.1611
    R-Factor(Observed) 0.1599
    R-Free 0.1989
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.0
    s_similar_adp_cmpnt 0.061
    s_rigid_bond_adp_cmpnt 0.0
    s_anti_bump_dis_restr 0.018
    s_non_zero_chiral_vol 0.046
    s_zero_chiral_vol 0.045
    s_from_restr_planes 0.0239
    s_similar_dist 0.0
    s_angle_d 0.025
    s_bond_d 0.008
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2709
    Nucleic Acid Atoms 0
    Heterogen Atoms 58
    Solvent Atoms 211
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution SHELX
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building SHELX
    data collection CrystalClear