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X-RAY DIFFRACTION
Materials and Methods page
3D92
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7.8
    Temperature 300.0
    Details 1.3M sodium citrate, 100mM Tris-HCl, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 300K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 42.7 α = 90
    b = 41.7 β = 104.6
    c = 73 γ = 90
     
    Space Group
    Space Group Name:    P 1 21 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 210
    Collection Date 2008-04-19
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type CHESS BEAMLINE A1
    Wavelength List 0.9772
    Site CHESS
    Beamline A1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.1
    Resolution(Low) 20
    Number Reflections(Observed) 98514
    Percent Possible(Observed) 99.9
    R Merge I(Observed) 0.088
    Redundancy 11.4
     
    High Resolution Shell Details
    Resolution(High) 1.1
    Resolution(Low) 1.12
    Percent Possible(All) 100.0
    R Merge I(Observed) 0.519
    Redundancy 10.8
    Number Unique Reflections(All) 4941
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method FOURIER SYNTHESIS
    reflnsShellList 1.1
    Resolution(Low) 20.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 98494
    Number of Reflections(Observed) 98494
    Number of Reflections(R-Free) 4925
    Percent Reflections(Observed) 99.9
    R-Factor(All) 0.1001
    R-Factor(Observed) 0.1001
    R-Work 0.1
    R-Free 0.129
    R-Free Selection Details random
     
    Temperature Factor Modeling
    Isotropic Thermal Model anisotropic
    Mean Isotropic B Value 14.503
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.1
    Shell Resolution(Low) 1.12
    Number of Reflections(Observed) 4941
    Percent Reflections(Observed) 100.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_angle_d 2.1
    s_bond_d 0.015
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2049
    Nucleic Acid Atoms 0
    Heterogen Atoms 19
    Solvent Atoms 307
     
     
  •   Software and Computing Hide
    Computing
    Data Collection ADSC Quantum
    Data Reduction (intensity integration) HKL
    Data Reduction (data scaling) HKL
    Structure Refinement SHELXL-97
     
    Software
    data extraction pdb_extract version: 3.005
    refinement SHELX
    data processing HKL