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An Information Portal to 105339 Biological Macromolecular Structures

X-RAY DIFFRACTION
Materials and Methods page
3BLD
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 8.5
    Temperature 291.0
    Details 100mM Tris/HCl, 1mM DTT, 5% PEG 8000, 10% DMSO, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 89.65 α = 90
    b = 64.88 β = 95.55
    c = 70.33 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MAR CCD 165 mm
    Collection Date 2007-03-16
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type BESSY BEAMLINE 14.2
    Wavelength List 0.97803
    Site BESSY
    Beamline 14.2
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.19
    Resolution(Low) 8
    Number Reflections(All) 224997
    Number Reflections(Observed) 116963
    Percent Possible(Observed) 91.0
    Redundancy 3.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.19
    Resolution(Low) 8.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 116963
    Number of Reflections(Observed) 116963
    Percent Reflections(Observed) 91.0
    R-Factor(All) 0.1512
    R-Work 0.1508
    R-Free 0.1854
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.074
    s_similar_adp_cmpnt 0.039
    s_rigid_bond_adp_cmpnt 0.005
    s_anti_bump_dis_restr 0.053
    s_non_zero_chiral_vol 0.068
    s_zero_chiral_vol 0.069
    s_from_restr_planes 0.0252
    s_similar_dist 0.0
    s_angle_d 0.028
    s_bond_d 0.012
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2654
    Nucleic Acid Atoms 0
    Heterogen Atoms 26
    Solvent Atoms 250
     
     
  •   Software and Computing Hide
    Computing
    Data Collection MAR345dtb
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution CNS
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building SHELX