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X-RAY DIFFRACTION
Materials and Methods page
3AXX
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.5
    Temperature 295.0
    Details 1.5M ammonium phosphate, 0.1M MES buffer, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 162.47 α = 90
    b = 58.49 β = 109.33
    c = 138.5 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Collection Date 2009-03-05
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SPRING-8 BEAMLINE BL44XU
    Wavelength List 0.9
    Site SPRING-8
    Beamline BL44XU
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.9
    Resolution(Low) 50
    Number Reflections(All) 97064
    Number Reflections(Observed) 94740
    Percent Possible(Observed) 97.6
    Redundancy 3.5
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.9
    Resolution(Low) 50.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 91847
    Number of Reflections(R-Free) 4609
    Percent Reflections(Observed) 94.6
    R-Work 0.2283
    R-Free 0.241
     
    Temperature Factor Modeling
    Mean Isotropic B Value 36.6026
    Anisotropic B[1][1] 10.744
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 9.296
    Anisotropic B[2][2] -4.951
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -5.793
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.9
    Shell Resolution(Low) 2.02
    R-Factor(R-Work) 0.354
    R-Factor(R-Free) 0.362
    Percent Reflections(Observed) 85.5
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    c_scangle_it 2.398
    c_mcangle_it 1.914
    c_scbond_it 1.704
    c_mcbond_it 1.232
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 9244
    Nucleic Acid Atoms 0
    Heterogen Atoms 84
    Solvent Atoms 486
     
     
  •   Software and Computing Hide
    Computing
    Data Collection HKL-2000
    Data Reduction (intensity integration) HKL
    Data Reduction (data scaling) HKL
    Structure Solution CNS
    Structure Refinement CNS
     
    Software
    data extraction pdb_extract version: 3.10
    refinement CNS
    data processing HKL