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X-RAY DIFFRACTION
Materials and Methods page
3AL7
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.5
    Temperature 293.0
    Details 0.02M ADA, 0.75M TARTRATE. 20%GLYCEROL, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 57.7 α = 90
    b = 57.7 β = 90
    c = 149.78 γ = 90
     
    Space Group
    Space Group Name:    P 41 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Type RIGAKU RAXIS V
    Collection Date 2009-04-18
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type SPRING-8 BEAMLINE BL38B1
    Wavelength 0.7
    Site SPRING-8
    Beamline BL38B1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.1
    Resolution(Low) 20
    Number Reflections(Observed) 102055
    Percent Possible(Observed) 98.9
    R Merge I(Observed) 0.084
    Redundancy 6.5
     
    High Resolution Shell Details
    Resolution(High) 1.1
    Resolution(Low) 1.14
    Percent Possible(All) 90.8
    R Merge I(Observed) 0.368
    Mean I Over Sigma(Observed) 2.2
    Redundancy 4.2
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.1
    Resolution(Low) 10.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 96945
    Number of Reflections(Observed) 102055
    Percent Reflections(Observed) 94.0
    R-Factor(All) 0.108
    R-Free 0.1354
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.1
    Shell Resolution(Low) 1.15
    Number of Reflections(Observed) 11728
    R-Factor(R-Work) 0.221
    Percent Reflections(Observed) 92.33
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.116
    s_similar_adp_cmpnt 0.051
    s_rigid_bond_adp_cmpnt 0.006
    s_anti_bump_dis_restr 0.03
    s_non_zero_chiral_vol 0.092
    s_zero_chiral_vol 0.097
    s_from_restr_planes 0.0329
    s_similar_dist 0.0
    s_angle_d 0.034
    s_bond_d 0.017
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1551
    Nucleic Acid Atoms 0
    Heterogen Atoms 44
    Solvent Atoms 476
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution SHELX
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building SHELX