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X-RAY DIFFRACTION
Materials and Methods page
2YOP
  •   Crystallization Hide
    Crystallization Experiments
    pH 7
    Details pH 7
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 42.93 α = 90
    b = 90.44 β = 90
    c = 185.28 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector PIXEL (PILATUS 6M)
    Type DECTRIS
    Collection Date 2011-02-24
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID29
    Wavelength 2.066
    Site ESRF
    Beamline ID29
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 1.0
    Resolution(High) 2.3
    Resolution(Low) 30.56
    Number Reflections(Observed) 32116
    Percent Possible(Observed) 97.4
    R Merge I(Observed) 0.09
    B(Isotropic) From Wilson Plot 48.46
    Redundancy 20.9
     
    High Resolution Shell Details
    Resolution(High) 2.3
    Resolution(Low) 2.42
    Percent Possible(All) 83.2
    R Merge I(Observed) 0.66
    Mean I Over Sigma(Observed) 2.2
    Redundancy 7.2
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method SAD
    reflnsShellList 2.3
    Resolution(Low) 29.76
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 32057
    Number of Reflections(R-Free) 1619
    Percent Reflections(Observed) 97.02
    R-Factor(Observed) 0.187
    R-Work 0.1848
    R-Free 0.2292
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 46.38
    Anisotropic B[1][1] -14.2115
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 5.9724
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 8.2391
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.3
    Shell Resolution(Low) 2.38
    Number of Reflections(R-Free) 108
    Number of Reflections(R-Work) 2105
    R-Factor(R-Work) 0.2253
    R-Factor(R-Free) 0.2707
    Percent Reflections(Observed) 97.02
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    t_bond_d 0.01
    t_angle_deg 1.19
    t_omega_torsion 3.45
    t_other_torsion 19.7
     
    Coordinate Error
    Luzzati ESD(Observed) 0.26
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 4239
    Nucleic Acid Atoms 0
    Heterogen Atoms 18
    Solvent Atoms 320
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) SCALA
    Structure Solution SHARP
    Structure Refinement BUSTER 2.11.1
     
    Software
    refinement BUSTER version: 2.11.1
    model building SHARP