X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 135.52 α = 90
b = 175.93 β = 90
c = 128.91 γ = 90
Symmetry
Space Group C 2 2 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC CCD -- 2005-10-01
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF BEAMLINE ID14-1 -- ESRF ID14-1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.9 52.06 99.8 0.09 -- -- 3.4 -- 121101 -- 1.1 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.9 2.0 100.0 0.6 -- 1.1 3.4 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.895 51.993 -- 0.0 -- 112093 5598 92.11 -- 0.1891 0.1871 0.2274 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.8953 1.9631 -- 483 9371 0.3631 0.3835 -- 82.0
X Ray Diffraction 1.9631 2.0417 -- 510 9473 0.2234 0.2583 -- 83.0
X Ray Diffraction 2.0417 2.1346 -- 539 10436 0.1968 0.2389 -- 91.0
X Ray Diffraction 2.1346 2.2471 -- 530 9980 0.2451 0.2942 -- 87.0
X Ray Diffraction 2.2471 2.3879 -- 529 10324 0.1941 0.2503 -- 90.0
X Ray Diffraction 2.3879 2.5723 -- 605 11078 0.1774 0.2238 -- 96.0
X Ray Diffraction 2.5723 2.8312 -- 561 11309 0.1713 0.2195 -- 98.0
X Ray Diffraction 2.8312 3.2408 -- 608 11415 0.1647 0.2166 -- 99.0
X Ray Diffraction 3.2408 4.0828 -- 577 11520 0.1506 0.1901 -- 99.0
X Ray Diffraction 4.0828 52.0128 -- 656 11589 0.1687 0.1971 -- 97.0
RMS Deviations
Key Refinement Restraint Deviation
f_angle_d 1.194
f_bond_d 0.009
f_plane_restr 0.005
f_chiral_restr 0.087
f_dihedral_angle_d 13.207
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 8061
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 1158

Software

Software
Software Name Purpose
PHENIX refinement version: (PHENIX.REFINE)
MOSFLM data reduction
SCALA data scaling
MOLREP phasing