X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 47.23 α = 90
b = 41.18 β = 101.28
c = 49.83 γ = 90
Symmetry
Space Group P 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
-- -- -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE -- -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.8 37.48 96.1 0.15 -- -- 2.4 -- 4767 -- 0.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 2.801 48.8 -- -- -- 4356 223 96.1 -- 0.25166 0.24383 0.40685 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.801 2.874 -- 15 319 0.326 0.234 -- 97.38
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 42.975
Anisotropic B[1][1] 2.6
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -0.64
Anisotropic B[2][2] -4.3
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 1.45
RMS Deviations
Key Refinement Restraint Deviation
r_gen_planes_other 0.001
r_gen_planes_refined 0.004
r_chiral_restr 0.072
r_dihedral_angle_4_deg 27.184
r_dihedral_angle_3_deg 19.011
r_dihedral_angle_2_deg 41.132
r_dihedral_angle_1_deg 7.461
r_angle_other_deg 0.909
r_angle_refined_deg 1.38
r_bond_other_d 0.001
r_bond_refined_d 0.012
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1679
Nucleic Acid Atoms 0
Heterogen Atoms 22
Solvent Atoms 69

Software

Computing
Computing Package Purpose
REFMAC 5.6.0062 Structure Refinement
Software
Software Name Purpose
REFMAC version: 5.6.0062 refinement