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X-RAY DIFFRACTION
Materials and Methods page
2WI6
  •   Crystallization Hide
    Crystallization Experiments
    pH 6.5
    Details pH 6.5
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 64.93 α = 90
    b = 87.96 β = 90
    c = 99.13 γ = 90
     
    Space Group
    Space Group Name:    I 2 2 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE (RAXIS IV)
    Type RIGAKU
    Details OSMIC BLUE MIRRORS
    Collection Date 2007-11-09
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU RUH3R
    Wavelength 1.5418
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 3.0
    Resolution(High) 2.18
    Resolution(Low) 30
    Number Reflections(Observed) 14988
    Percent Possible(Observed) 86.3
    R Merge I(Observed) 0.05
    Redundancy 3.0
     
    High Resolution Shell Details
    Resolution(High) 2.18
    Resolution(Low) 2.9
    Percent Possible(All) 58.3
    R Merge I(Observed) 0.27
    Mean I Over Sigma(Observed) 3.8
    Redundancy 2.0
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.18
    Resolution(Low) 65.8
    Number of Reflections(Observed) 12290
    Number of Reflections(R-Free) 631
    Percent Reflections(Observed) 85.5
    R-Factor(Observed) 0.237
    R-Work 0.233
    R-Free 0.304
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 57.7
    Anisotropic B[1][1] -0.35
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 4.63
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -4.28
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.18
    Shell Resolution(Low) 2.24
    Number of Reflections(R-Free) 36
    Number of Reflections(R-Work) 538
    R-Factor(R-Work) 0.291
    R-Factor(R-Free) 0.361
    Percent Reflections(Observed) 51.9
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 4.699
    r_scbond_it 2.851
    r_mcangle_it 2.04
    r_mcbond_it 1.134
    r_gen_planes_refined 0.009
    r_chiral_restr 0.136
    r_dihedral_angle_4_deg 21.356
    r_dihedral_angle_3_deg 19.085
    r_dihedral_angle_2_deg 34.659
    r_dihedral_angle_1_deg 8.265
    r_angle_refined_deg 2.096
    r_bond_refined_d 0.02
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1629
    Nucleic Acid Atoms 0
    Heterogen Atoms 23
    Solvent Atoms 31
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) D*TREK
    Data Reduction (data scaling) D*TREK
    Structure Solution AMORE
    Structure Refinement REFMAC 5.5.0066
     
    Software
    refinement REFMAC version: 5.5.0066
    model building AMORE