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X-RAY DIFFRACTION
Materials and Methods page
2W70
  •   Crystallization Hide
    Crystallization Experiments
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 84.23 α = 90
    b = 106.21 β = 90
    c = 122.64 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type APS BEAMLINE 17-ID
    Wavelength 1.00
    Site APS
    Beamline 17-ID
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.77
    Resolution(Low) 80
    Number Reflections(Observed) 107085
    Percent Possible(Observed) 99.9
    R Merge I(Observed) 0.08
    Redundancy 4.94
     
    High Resolution Shell Details
    Resolution(High) 1.77
    Resolution(Low) 1.83
    Percent Possible(All) 99.9
    R Merge I(Observed) 0.54
    Mean I Over Sigma(Observed) 2.35
    Redundancy 4.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.77
    Resolution(Low) 20.0
    Number of Reflections(Observed) 101581
    Number of Reflections(R-Free) 5319
    Percent Reflections(Observed) 99.8
    R-Factor(Observed) 0.176
    R-Work 0.174
    R-Free 0.202
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 20.85
    Anisotropic B[1][1] -0.23
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.54
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.31
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.77
    Shell Resolution(Low) 1.82
    Number of Reflections(R-Free) 367
    Number of Reflections(R-Work) 7298
    R-Factor(R-Work) 0.273
    R-Factor(R-Free) 0.312
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 2.171
    r_scbond_it 1.467
    r_mcangle_it 0.75
    r_mcbond_it 0.683
    r_nbd_refined 0.194
    r_gen_planes_other 0.001
    r_gen_planes_refined 0.003
    r_chiral_restr 0.112
    r_dihedral_angle_4_deg 18.796
    r_dihedral_angle_3_deg 12.971
    r_dihedral_angle_2_deg 33.748
    r_dihedral_angle_1_deg 4.956
    r_angle_other_deg 1.142
    r_angle_refined_deg 1.118
    r_bond_other_d 0.001
    r_bond_refined_d 0.008
    r_nbd_other 0.181
    r_nbtor_refined 0.167
    r_nbtor_other 0.081
    r_xyhbond_nbd_refined 0.113
    r_symmetry_vdw_refined 0.119
    r_symmetry_vdw_other 0.219
    r_symmetry_hbond_refined 0.212
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 6866
    Nucleic Acid Atoms 0
    Heterogen Atoms 28
    Solvent Atoms 942
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL2000
    Data Reduction (data scaling) HKL2000
    Structure Solution MOLREP
    Structure Refinement REFMAC 5.2.0005
     
    Software
    refinement REFMAC version: 5.2.0005
    model building MOLREP