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X-RAY DIFFRACTION
Materials and Methods page
2VTH
  •   Crystallization Hide
    Crystallization Experiments
    pH 6.7
    Details 0.1M HEPES/NAOH PH7.4, 0.0475M AMMONIUM ACETATE, 12% W/V PEG 3350, pH 6.7
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 53.48 α = 90
    b = 71.65 β = 90
    c = 72.18 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type RIGAKU
    Details OSMIC CONFOCAL PURPLE
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU RU200 HR
    Wavelength 1.5418
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.9
    Resolution(Low) 32.23
    Number Reflections(Observed) 21572
    Percent Possible(Observed) 96.1
    R Merge I(Observed) 0.05
    B(Isotropic) From Wilson Plot 29.142
    Redundancy 2.49
     
    High Resolution Shell Details
    Resolution(High) 1.9
    Resolution(Low) 1.97
    Percent Possible(All) 78.8
    R Merge I(Observed) 0.26
    Mean I Over Sigma(Observed) 2.6
    Redundancy 1.62
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.9
    Resolution(Low) 32.23
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 21572
    Number of Reflections(R-Free) 1066
    Percent Reflections(Observed) 95.77
    R-Factor(Observed) 0.2003
    R-Work 0.1982
    R-Free 0.2406
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 35.34
    Anisotropic B[1][1] -0.118891
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -5.35915
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 5.47804
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.9
    Shell Resolution(Low) 2.01
    Number of Reflections(R-Free) 151
    Number of Reflections(R-Work) 2762
    R-Factor(R-Work) 0.2264
    R-Factor(R-Free) 0.2934
    Percent Reflections(Observed) 95.77
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2244
    Nucleic Acid Atoms 0
    Heterogen Atoms 21
    Solvent Atoms 249
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) CRYSTAL CLEAR
    Data Reduction (data scaling) CRYSTAL CLEAR
    Structure Solution AMORE
    Structure Refinement BUSTER-TNT 2.1.1
     
    Software
    refinement BUSTER-TNT version: 2.1.1
    model building AMORE