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X-RAY DIFFRACTION
Materials and Methods page
2UZ6
  •   Crystallization Hide
    Crystallization Experiments
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 72.54 α = 90.14
    b = 85.75 β = 80.01
    c = 121.67 γ = 70.64
     
    Space Group
    Space Group Name:    P 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Collection Date 2006-04-23
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID23-2
    Wavelength 0.873
    Site ESRF
    Beamline ID23-2
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 2.0
    Resolution(High) 2.4
    Resolution(Low) 67.42
    Number Reflections(Observed) 102052
    Percent Possible(Observed) 95.9
    R Merge I(Observed) 0.14
    Redundancy 3.82
     
    High Resolution Shell Details
    Resolution(High) 2.4
    Resolution(Low) 2.53
    Percent Possible(All) 95.2
    R Merge I(Observed) 0.66
    Mean I Over Sigma(Observed) 1.0
    Redundancy 3.83
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.4
    Resolution(Low) 67.42
    Number of Reflections(Observed) 109745
    Number of Reflections(R-Free) 5836
    Percent Reflections(Observed) 95.9
    R-Factor(Observed) 0.237
    R-Work 0.236
    R-Free 0.252
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 29.17
    Anisotropic B[1][1] 5.64
    Anisotropic B[1][2] -2.75
    Anisotropic B[1][3] -0.12
    Anisotropic B[2][2] -1.07
    Anisotropic B[2][3] -0.49
    Anisotropic B[3][3] -2.71
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.3
    Shell Resolution(Low) 2.36
    Number of Reflections(R-Free) 443
    Number of Reflections(R-Work) 7971
    R-Factor(R-Work) 0.395
    R-Factor(R-Free) 0.419
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 1.36
    r_scbond_it 0.944
    r_mcangle_it 0.979
    r_mcbond_it 0.612
    r_nbd_refined 0.236
    r_gen_planes_refined 0.005
    r_chiral_restr 0.115
    r_dihedral_angle_4_deg 17.649
    r_dihedral_angle_3_deg 14.486
    r_dihedral_angle_2_deg 33.378
    r_dihedral_angle_1_deg 3.844
    r_angle_refined_deg 1.643
    r_bond_refined_d 0.01
    r_nbtor_refined 0.317
    r_xyhbond_nbd_refined 0.171
    r_symmetry_vdw_refined 0.206
    r_symmetry_hbond_refined 0.168
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 17510
    Nucleic Acid Atoms 0
    Heterogen Atoms 40
    Solvent Atoms 607
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) SCALA
    Structure Solution PHASER
    Structure Refinement REFMAC 5.2.0019
     
    Software
    refinement REFMAC version: 5.2.0019
    model building PHASER