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X-RAY DIFFRACTION
Materials and Methods page
2UUY
  •   Crystallization Hide
    Crystallization Experiments
    Details 0.1 M BIS-TRIS, PH 6.5 0.2 M MGCL2 25% PEG3350 (W/V)
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 46.95 α = 90
    b = 67.69 β = 90
    c = 69.07 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MARRESEARCH
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE BM14
    Wavelength 0.978
    Site ESRF
    Beamline BM14
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.15
    Resolution(Low) 30
    Number Reflections(Observed) 77853
    Percent Possible(Observed) 98.4
    R Merge I(Observed) 0.07
    Redundancy 6.9
     
    High Resolution Shell Details
    Resolution(High) 1.15
    Resolution(Low) 1.25
    Percent Possible(All) 94.0
    R Merge I(Observed) 0.38
    Mean I Over Sigma(Observed) 2.4
    Redundancy 2.8
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.15
    Resolution(Low) 48.34
    Number of Reflections(Observed) 73793
    Number of Reflections(R-Free) 3902
    Percent Reflections(Observed) 98.4
    R-Factor(Observed) 0.132
    R-Work 0.13
    R-Free 0.163
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 8.63
    Anisotropic B[1][1] -0.45
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.34
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.11
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.15
    Shell Resolution(Low) 1.18
    Number of Reflections(R-Free) 250
    Number of Reflections(R-Work) 4683
    R-Factor(R-Work) 0.269
    R-Factor(R-Free) 0.314
    Percent Reflections(Observed) 85.33
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 3.663
    r_scbond_it 2.726
    r_mcangle_it 2.106
    r_mcbond_other 0.653
    r_mcbond_it 1.501
    r_nbd_refined 0.206
    r_gen_planes_other 0.001
    r_gen_planes_refined 0.008
    r_chiral_restr 0.094
    r_dihedral_angle_4_deg 18.613
    r_dihedral_angle_3_deg 11.59
    r_dihedral_angle_2_deg 39.812
    r_dihedral_angle_1_deg 6.506
    r_angle_other_deg 0.912
    r_angle_refined_deg 1.556
    r_bond_other_d 0.002
    r_bond_refined_d 0.013
    r_nbd_other 0.19
    r_nbtor_refined 0.182
    r_nbtor_other 0.091
    r_xyhbond_nbd_refined 0.197
    r_metal_ion_refined 0.262
    r_symmetry_vdw_refined 0.18
    r_symmetry_vdw_other 0.235
    r_symmetry_hbond_refined 0.186
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2026
    Nucleic Acid Atoms 0
    Heterogen Atoms 2
    Solvent Atoms 510
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) DENZO
    Data Reduction (data scaling) SCALEPACK
    Structure Solution PHASER
    Structure Refinement REFMAC 5.2.0019
     
    Software
    refinement REFMAC version: 5.2.0019
    model building PHASER