An Information Portal to 111558 Biological Macromolecular Structures

Materials and Methods page
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Varian
    Model INOVA
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 1.5 mM H4K5ac-1, 0.54 mM [U-99% 13C; U-99% 15N] Bromodomain-2, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 100
    pH 6.5
    Pressure ambient
    Temperature 288
  •   NMR Refinement Information Hide
    Method torsion angle dynamics, molecular dynamics
  •   NMR Ensemble Information Hide
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
  •   NMR Experimental Information Hide
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 13C-edited (F1)
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 13C/15N-filtered (F3) 3D NOESY
  •   Software and Computing Hide
    NMR Software
    Classification refinement
    Software Name CYANA
    Authors Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
    Classification refinement
    Software Name AMBER 5
    Authors Guntert, Mumenthaler and Wuthrich
    Classification structure solution
    Software Name CYANA 2.1
    Authors Kobayashi, N.
    Classification data analysis
    Software Name Kujira 0.9905
    Authors Johnson, One Moon Scientific
    Classification processing
    Software Name NMRView 5.0.4
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe 20100701