POP-OUT | CLOSE
 
X-RAY DIFFRACTION
Materials and Methods page
2Q9O
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 4.5
    Temperature 295.0
    Details 15% PMME 2000, 0.2 M ammonium sulphate, 0.1 M sodium acetate , pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 173.74 α = 90
    b = 61.9 β = 96.36
    c = 124.21 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 4
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Wavelength List 0.93100
    Site ESRF
    Beamline ID14-3
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.3
    Resolution(Low) 20
    Number Reflections(All) 321397
    Number Reflections(Observed) 310642
    Percent Possible(Observed) 96.7
     
    High Resolution Shell Details
    Resolution(High) 1.3
    Resolution(Low) 1.4
    Percent Possible(All) 91.5
    Mean I Over Sigma(Observed) 3.0
    R-Sym I(Observed) 0.419
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method AB INITIO
    reflnsShellList 1.3
    Resolution(Low) 15.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 294994
    Number of Reflections(Observed) 294994
    Number of Reflections(R-Free) 15526
    Percent Reflections(Observed) 91.9
    R-Factor(All) 0.1674
    R-Factor(Observed) 0.1674
    R-Work 0.1674
    R-Free 0.2124
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 13.989
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.018
    s_similar_adp_cmpnt 0.018
    s_rigid_bond_adp_cmpnt 0.003
    s_anti_bump_dis_restr 0.017
    s_non_zero_chiral_vol 0.07
    s_zero_chiral_vol 0.06
    s_from_restr_planes 0.0303
    s_similar_dist 0.0
    s_angle_d 0.028
    s_bond_d 0.01
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 8740
    Nucleic Acid Atoms 0
    Heterogen Atoms 500
    Solvent Atoms 1443
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) XDS
    Data Reduction (data scaling) XSCALE
    Structure Solution SHELX
    Structure Refinement SHELXL-97
     
    Software
    data extraction pdb_extract version: 2.000
    refinement SHELX