SOLUTION NMR Experimental Data


Experimental Details
Sample Conditions
Sample Contents1.3-2.2 mM 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.3-2.2 mM [U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-15N HSQC, 3D 15N-edited NOESY-HSQC, 1D 15N-decoupled 1H WATERGATE, 1D 15N-filtered 1H WATERGATE, 2D 1H-15N HSQC NH2 only, 1D 15N-edited 1H WATERGATE, 2D 1H-15N NHH COSY
Sample Contents1.3-2.2 mM 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.3-2.2 mM [U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)288
Experiment(s):2D 1H-15N CPMG NOESY
Sample Contents1.5 mM 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.5 mM [U-13C; U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):3D 15N/13C-edited NOESY-HSQC
Sample Contents0.2-0.3 mM [U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 0.2-0.3 mM [U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 14.6-20.5 mg/mL Pf1 phage, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-15N HSQC
Sample Contents1.5 mM 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.5 mM [U-13C; U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-13C CT-HSQC, 3D 13C-edited HMQC-NOESY, 3D HCCH-COSY
Sample Contents1.4 mM [U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.4 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-1H flip-back WATERGATE NOESY, 3D 15N-edited NOESY-HSQC, 2D 1H-15N HSQC, 1D 15N-decoupled 1H WATERGATE, 1D 15N-filtered 1H WATERGATE, 1D 15N-edited 1H WATERGATE, 2D 1H-15N HSQC NH2 only, 2D 1H-15N NHH COSY
Sample Contents1.4 mM [U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.4 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)288
Experiment(s):2D 1H-15N CPMG NOESY
Sample Contents1.7 mM [U-13C; U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.7 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-13C CT-HSQC, 3D 13C-edited HMQC-NOESY, 3D HCCH-COSY
Sample Contents1.4 mM [U-13C; U-15N]-Gua 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.4 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-13C CT-HSQC, 3D 13C-edited HMQC-NOESY
Sample Contents1.4 mM [U-13C; U-15N]-Gua 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.4 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-13C CT-HSQC, 3D 13C-edited HMQC-NOESY, 3D HCCH-COSY
Sample Contents1.4 mM [U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.4 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-15N HMQC J=21Hz
Sample Contents1.3 mM 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.3 mM [U-15N] 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 100% D2O
Solvent100% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-15N HMQC J=21Hz
Sample Contents1.7 mM [U-13C; U-15N] 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 1.7 mM 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3', 10 mM [U-2H] Tris, 50 mM sodium chloride, 0.05 mM sodium azide, 5 mM magnesium chloride, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength50 mM NaCl, 5 mM MgCl2
pH7.0
Pressureambient
Temperature (K)298
Experiment(s):3D 15N/13C-edited NOESY-HSQC
Spectrometer Information
Manufacturer Model Field Strength
Varian INOVA 600.0
Varian INOVA 500.0
NMR Refinement
Method simulated annealing
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 500
Conformers Submitted Total Number 21
Representative Model Choice Rationale
1 minimized average structure
Computation: NMR Software
# Classification Software Name Author
1 structure analysis CURVES_+ (CURVES) Lavery, R., Moakher, M., Maddocks, J.H., Petkeviciute, D. and Zakrzewska, K.
2 peak picking CCPNMR_suite CCPN
3 data analysis CCPNMR_suite CCPN
4 chemical shift assignment CCPNMR_suite CCPN
5 structure display PyMOL Schrodinger
6 structure analysis PyMOL Schrodinger
7 structure solution X-PLOR_NIH Schwieters, Kuszewski, Tjandra and Clore
8 refinement X-PLOR_NIH Schwieters, Kuszewski, Tjandra and Clore
9 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
10 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax