POP-OUT | CLOSE
 
SOLUTION NMR
Materials and Methods page
2ME6
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    closest to the average  
     
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Bruker
    Model Avance
    Field Strength 600.0
    Manufacturer Bruker
    Model Avance
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.8 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide, 0.8 mM DNA, 95% H2O/5% D2O
    Solvent System 95% H2O/5% D2O
    Ionic Strength 0.220
    pH 6.5
    Pressure ambient
    Temperature 308
    IDs solution ID:2 condition ID:1
    Sample Contents 0.8 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide, 0.8 mM DNA, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 0.220
    pH 6.5
    Pressure ambient
    Temperature 308
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method molecular dynamics
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the least restraint violations
    Conformers Calculated Total Number 200
    Conformers Submitted Total Number 4
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:10 solution ID:2 conditons ID:1
    Type 2D 1H-1H TOCSY
    IDs experiment ID:11 solution ID:2 conditons ID:1
    Type 3D F2-edited, F3-filtered 1H-13C NOESY
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aliphatic
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aromatic
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type APSY 4D-HACANH
    IDs experiment ID:6 solution ID:1 conditons ID:1
    Type APSY 5D-CBCACONH
    IDs experiment ID:7 solution ID:1 conditons ID:1
    Type APSY 5D-HACACONH
    IDs experiment ID:8 solution ID:1 conditons ID:1
    Type 2D 13C/15N double-filtered 1H-1H NOESY
    IDs experiment ID:9 solution ID:2 conditons ID:1
    Type 2D 13C/15N double-filtered 1H-1H NOESY
     
  •   Software and Computing Hide
    NMR Software
    Authors Van Dijk and Bovin
    Classification structure solution
    Software Name 3D_DART
    Authors Bartels et al.
    Classification data analysis
    Software Name XEASY
    Authors Alexandre Bonvin
    Classification refinement
    Software Name HADDOCK
    Authors Linge, O'Donoghue and Nilges
    Classification refinement
    Software Name ARIA
    Authors Brunger A. T. et.al.
    Classification structure solution
    Software Name CNS
    Authors Brunger A. T. et.al.
    Classification chemical shift assignment
    Software Name CNS
    Authors Keller and Wuthrich
    Classification structure solution
    Software Name CNS
    Authors Keller and Wuthrich
    Classification chemical shift assignment
    Software Name CNS
    Authors Brunger A. T. et.al.
    Classification structure solution
    Software Name CNS
    Authors Brunger A. T. et.al.
    Classification chemical shift assignment
    Software Name CNS
    Authors Keller and Wuthrich
    Classification structure solution
    Software Name CNS
    Authors Keller and Wuthrich
    Classification chemical shift assignment
    Software Name CNS
    Authors Herrmann and Wuthrich
    Classification chemical shift assignment
    Software Name UNIO
    Authors Herrmann and Wuthrich
    Classification structure solution
    Software Name UNIO
    Authors Bruker Biospin
    Classification processing
    Software Name TOPSPIN
    Authors Bruker Biospin
    Classification collection
    Software Name TOPSPIN