Solution structure of the RRM domain of the hypothetical protein CAGL0M09691g from Candida glabrata

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SOLUTION NMR

Materials and Methods page

2M4M

FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
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PDBML/XML File (Header)

FASTA Sequence
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PDBx/mmCIF File (gz)
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Biological Assembly (gz) (A)
NMR Restraints (Text)
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NMR Eperiment Details

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Representative Model Choice Rationale

Spectrometer Info

Sample Conditions

IDs	solution ID:1 condition ID:1
Sample Contents	1.0 mM [U-100% 13C; U-100% 15N] RRM domain of the hypothetical protein, 10 mM sodium acetate, 100 mM sodium chloride, 0.5 mM DTT, 0.5 mM EDTA, 90% H2O, 10% D2O
Solvent System	90% H2O, 10% D2O
Ionic Strength	110
pH	4.5
Pressure	1
Pressure Units	atm
Temperature	298
IDs	solution ID:2 condition ID:1
Sample Contents	1.0 mM [U-100% 13C; U-100% 15N] RRM domain of the hypothetical protein, 10 mM sodium acetate, 100 mM sodium chloride, 0.5 mM DTT, 0.5 mM EDTA, 100% D2O
Solvent System	100% D2O
Ionic Strength	110
pH	4.5
Pressure	1
Pressure Units	atm
Temperature	298

NMR Refinement Information Hide

Refinement

Method simulating annealing

Details Refinement in a box of water

NMR Ensemble Information

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Ensemble

Conformer Selection Criteria	20 structures for lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20

NMR Experimental Information

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Experiment

IDs	experiment ID:1 solution ID:1 conditons ID:1
Type	15N HSQC
IDs	experiment ID:10 solution ID:1 conditons ID:1
Type	HNCOCA
IDs	experiment ID:11 solution ID:1 conditons ID:1
Type	HNCACB
IDs	experiment ID:12 solution ID:1 conditons ID:1
Type	CBCACONH
IDs	experiment ID:2 solution ID:1 conditons ID:1
Type	15N NOESY-HSQC
IDs	experiment ID:3 solution ID:2 conditons ID:1
Type	13C HSQC
IDs	experiment ID:4 solution ID:2 conditons ID:1
Type	aromatic 13C HSQC
IDs	experiment ID:5 solution ID:2 conditons ID:1
Type	13C NOESY-HSQC
IDs	experiment ID:6 solution ID:2 conditons ID:1
Type	13C aromatic NOESY-HSQC
IDs	experiment ID:7 solution ID:1 conditons ID:1
Type	HNCO
IDs	experiment ID:8 solution ID:1 conditons ID:1
Type	HNCACO
IDs	experiment ID:9 solution ID:1 conditons ID:1
Type	HNCA

Additional NMR Experimental Information Hide

Details

Detail All 3D experiments were acquired with 30% non-uniform sampling using the MDDNMR approach

Software and Computing

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NMR Software

Classification	refinement
Software Name	X-PLOR_NIH
Authors	Schwieters, Kuszewski, Tjandra and Clore
Classification	structure solution
Software Name	X-PLOR_NIH 2.32
Authors	Linge, O'Donoghue and Nilges
Classification	data analysis
Software Name	ARIA 2.3
Authors	CCPN
Classification	data analysis
Software Name	CCPN_Analysis 2.2
Authors	(MDDNMR) Orekhov, Jaravine, Kazimierczuk
Classification	processing
Software Name	MDDNMR 2.2
Authors	(MDDNMR) Orekhov, Jaravine, Kazimierczuk
Classification	collection
Software Name	MDDNMR 2.2
Authors	Bruker Biospin
Classification	collection
Software Name	TOPSPIN 2.1
Authors	Varian
Classification	collection
Software Name	VNMRJ 2.2D
Authors	Brunger A. T. et.al.
Classification	refinement
Software Name	CNS 1.21

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