POP-OUT | CLOSE
 
SOLUTION NMR
Materials and Methods page
2M4H
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    closest to the average  
     
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Bruker
    Model Avance
    Field Strength 500.0
    Manufacturer Bruker
    Model DRX
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 20 mM HEPES, 1 mM sodium azide, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:1 condition ID:2
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 20 mM HEPES, 1 mM sodium azide, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:1 condition ID:3
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 20 mM HEPES, 1 mM sodium azide, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure Ambient
    Temperature 280
    IDs solution ID:2 condition ID:1
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:2 condition ID:2
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:2 condition ID:3
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 300
    pH 7.0
    Pressure Ambient
    Temperature 280
    IDs solution ID:3 condition ID:1
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 15 mg/mL Pf1 phage, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:3 condition ID:2
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 15 mg/mL Pf1 phage, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 283
    IDs solution ID:3 condition ID:3
    Sample Contents 100-200 uM [U-99% 13C; U-99% 15N] FCV VPg 7-76, 300 mM sodium chloride, 1 mM sodium azide, 20 mM HEPES, 15 mg/mL Pf1 phage, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure Ambient
    Temperature 280
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:10 solution ID:2 conditons ID:2
    Type 2D 1H-13C HSQC aliphatic
    IDs experiment ID:11 solution ID:3 conditons ID:3
    Type 2D 1H-15N HSQC
    IDs experiment ID:12 solution ID:1 conditons ID:1
    Type 3D HN(CA)CO
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 3D HNCACB
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type 3D HBHA(CBCACO)NH
    IDs experiment ID:6 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:7 solution ID:2 conditons ID:2
    Type 3D HCCH-TOCSY
    IDs experiment ID:8 solution ID:2 conditons ID:2
    Type 3D 1H-13C NOESY
    IDs experiment ID:9 solution ID:2 conditons ID:2
    Type 2D 1H-13C HSQC aromatic
     
  •   Software and Computing Hide
    NMR Software
    Authors Brunger, Adams, Clore, Gros, Nilges and Read
    Classification refinement
    Software Name CNS
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification data analysis
    Software Name NMRPipe
    Authors Zweckstetter et al., 2004
    Classification chemical shift assignment
    Software Name MARS
    Authors Johnson, One Moon Scientific
    Classification data analysis
    Software Name NMRView
    Authors Johnson, One Moon Scientific
    Classification chemical shift assignment
    Software Name NMRView
    Authors Linge, O'Donoghue and Nilges
    Classification structure solution
    Software Name ARIA
    Authors Cornilescu, Delaglio and Bax
    Classification geometry optimization
    Software Name TALOS