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SOLUTION NMR
Materials and Methods page
2M46
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 600.0
    Manufacturer Bruker
    Model Avance
    Field Strength 800.0
    Manufacturer Bruker
    Model Avance
    Field Strength 500.0
    Manufacturer Bruker
    Model Avance
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.3 mM [U-100% 13C; U-100% 15N] SACOL0876, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 298
    IDs solution ID:2 condition ID:1
    Sample Contents 0.3 mM [U-100% 13C; U-100% 15N] SACOL0876, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail, 99% D2O
    Solvent System 99% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 298
    IDs solution ID:3 condition ID:1
    Sample Contents 0.2 mM [U-7% 13C; U-100% 15N] SACOL0876, 10 mM [U-100% 2H] TRIS, 300 mM sodium chloride, 10 mM [U-100% 2H] DTT, 0.01 % NaN3, 10 mM benzamidine, 1 x inhibitor cocktail, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 300
    pH 7.0
    Pressure ambient
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:10 solution ID:2 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:11 solution ID:3 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D HBHA(CO)NH
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 3D HNCA
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type 3D HCCH-TOCSY
    IDs experiment ID:6 solution ID:1 conditons ID:1
    Type 3D CCH-TOCSY
    IDs experiment ID:7 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:8 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:9 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aromatic
     
  •   Software and Computing Hide
    NMR Software
    Authors Lemak, Arrowsmith
    Classification chemical shift assignment
    Software Name FAWN
    Authors Bhattacharya and Montelione
    Classification nmr structure quality assessment
    Software Name PSVS
    Authors Huang, Tejero, Powers and Montelione
    Classification nmr structure quality assessment
    Software Name AutoStructure
    Authors Brunger, Adams, Clore, Gros, Nilges and Read
    Classification refinement
    Software Name CNS
    Authors Guntert, Mumenthaler and Wuthrich
    Classification structure solution
    Software Name CYANA 3.0
    Authors Lemak, Arrowsmith
    Classification chemical shift assignment
    Software Name FMCGUI 2.4
    Authors Goddard
    Classification data analysis
    Software Name SPARKY 3.95
    Authors Gutmanas, Arrowsmith
    Classification processing
    Software Name MDDGUI 1.0
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe 2.3