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An Information Portal to 105025 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
2M2S
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 600.0
    Manufacturer Bruker
    Model Avance
    Field Strength 500.0
    Manufacturer Bruker
    Model Avance
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.5 mM [Aba5,7,12,14]BTD, 10 uM DSS, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    pH 5
    Pressure ambient
    Temperature 298
    IDs solution ID:2 condition ID:1
    Sample Contents 0.6 mM [Aba5,7,12,14]BTD, 10 uM DSS, 100% D2O
    Solvent System 100% D2O
    pH 5
    Pressure ambient
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing, torsion angle dynamics
    Details Structures were calculated using the scripts from the RECOORD database. Used to calculate preliminary structures
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 50
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-1H TOCSY
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 2D 1H-1H NOESY
    IDs experiment ID:3 solution ID:2 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 2D DQF-COSY
    IDs experiment ID:5 solution ID:2 conditons ID:1
    Type 2D 1H-1H ECOSY
     
  •   Software and Computing Hide
    NMR Software
    Authors Guntert, Mumenthaler and Wuthrich
    Classification refinement
    Software Name CYANA 3.0
    Authors Brunger, Adams, Clore, Gros, Nilges and Read
    Classification refinement
    Software Name CNS 2.1
    Authors Guntert, Mumenthaler and Wuthrich
    Classification structure solution
    Software Name CYANA 3.0
    Authors Bruker Biospin
    Classification processing
    Software Name TOPSPIN 2.1
    Authors Bruker Biospin
    Classification collection
    Software Name TOPSPIN 2.1
    Authors CCPN
    Classification peak picking
    Software Name CcpNmr 2.1
    Authors CCPN
    Classification chemical shift assignment
    Software Name CcpNmr 2.1
    Authors CCPN
    Classification data analysis
    Software Name CcpNmr 2.1