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An Information Portal to 105339 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
2LY8
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    closest to the average  
     
    Spectrometer Info
    Field Strength 900.0
    Manufacturer Bruker
    Model Avance
    Field Strength 700.0
    Manufacturer Bruker
    Model Avance
    Field Strength 500.0
    Manufacturer Bruker
    Model Avance
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.8 mM [U-100% 15N] sC4, 0.8 mM [U-100% 13C; U-100% 15N] sC4, 0.8 mM [U-13C; U-15N; U-2H] sC4, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    pH 5.4
    Pressure ambient
    Temperature 308.1
    IDs solution ID:2 condition ID:1
    Sample Contents 0.8 mM [U-100% 13C; U-100% 15N] sC4, 100% D2O
    Solvent System 100% D2O
    pH 5.4
    Pressure ambient
    Temperature 308.1
    IDs solution ID:3 condition ID:1
    Sample Contents 0.8 mM sC4, 100% D2O
    Solvent System 100% D2O
    pH 5.4
    Pressure ambient
    Temperature 308.1
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method DGSA-distance geometry simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the least restraint violations
    Conformers Calculated Total Number 30
    Conformers Submitted Total Number 10
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:10 solution ID:2 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:11 solution ID:2 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:12 solution ID:3 conditons ID:1
    Type 2D 1H-1H NOESY
    IDs experiment ID:13 solution ID:2 conditons ID:1
    Type 3D H(CCO)NH
    IDs experiment ID:2 solution ID:3 conditons ID:1
    Type 2D 1H-1H NOESY
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 3D HNCACB
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:6 solution ID:1 conditons ID:1
    Type 3D HNCA
    IDs experiment ID:7 solution ID:1 conditons ID:1
    Type 3D HN(CO)CA
    IDs experiment ID:8 solution ID:2 conditons ID:1
    Type 3D HBHA(CO)NH
    IDs experiment ID:9 solution ID:2 conditons ID:1
    Type 3D HCCH-TOCSY
     
  •   Software and Computing Hide
    NMR Software
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification refinement
    Software Name X-PLOR_NIH
    Authors Koradi, Billeter and Wuthrich
    Classification structure solution
    Software Name Molmol
    Authors Laskowski and MacArthur
    Classification structure solution
    Software Name ProcheckNMR updated
    Authors Cornilescu, Delaglio and Bax
    Classification data analysis
    Software Name NMRDraw
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification structure solution
    Software Name X-PLOR_NIH updated
    Authors Johnson, One Moon Scientific
    Classification chemical shift assignment
    Software Name NMRView updated
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe updated