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SOLUTION NMR
Materials and Methods page
2LY5
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 600.0
    Manufacturer Varian
    Model INOVA
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 5
    pH 5.2
    Pressure ambient
    Temperature 310
    IDs solution ID:1 condition ID:2
    Sample Contents 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 5
    pH 5.2
    Pressure ambient
    Temperature 310
    IDs solution ID:2 condition ID:1
    Sample Contents 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 5
    pH 5.2
    Pressure ambient
    Temperature 310
    IDs solution ID:2 condition ID:2
    Sample Contents 1-2 mM [U-13C; U-15N] protein, 5 mM sodium chloride, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 5
    pH 5.2
    Pressure ambient
    Temperature 310
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method molecular dynamics
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 15
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:2 solution ID:2 conditons ID:2
    Type 2D 1H-15N HSQC
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:4 solution ID:2 conditons ID:2
    Type 2D 1H-13C HSQC
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aromatic
     
  •   Software and Computing Hide
    NMR Software
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification refinement
    Software Name X-PLOR_NIH
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification structure solution
    Software Name X-PLOR_NIH
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification geometry optimization
    Software Name X-PLOR_NIH
    Authors Cornilescu, Delaglio and Bax
    Classification backbone torsion angles
    Software Name TALOS
    Authors Varian
    Classification collection
    Software Name VNMRJ
    Authors Garrett
    Classification chemical shift assignment
    Software Name PIPP
    Authors Garrett
    Classification peak picking
    Software Name PIPP
    Authors Garrett
    Classification data analysis
    Software Name PIPP
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe