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Biological Macromolecular Structures Enabling Breakthroughs in Research and Education
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Structure Summary
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Annotations
Sequence
Sequence Similarity
Structure Similarity
Experiment
2LVR
Solution structure of Miz-1 zinc finger 8
Display Files
FASTA Sequence
PDB File
PDB File (Header)
mmCIF File
mmCIF File (Header)
PDBML/XML File
PDBML/XML File (Header)
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FASTA Sequence
PDB File (Text)
PDB File (gz)
PDBx/mmCIF File
PDBx/mmCIF File (gz)
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PDBML/XML File (gz)
Biological Assembly (gz) (A)
NMR Restraints (Text)
NMR Restraints (gz)
V2 NMR Restraints (gz)
Chemical Shifts (gz)
SOLUTION NMR Experimental Data
Experimental Details
Sample Conditions
Sample Contents
0.75 - 1.00 mM [U-13C; U-15N] Miz8, 90% H2O/10% D2O
Solvent
90% H2O/10% D2O
Ionic Strength
0.05
pH
6.5
Pressure
ambient
Temperature (K)
298
Experiment(s):
2D 1H-15N HSQC, 3D 1H-13C NOESY aliphatic, 3D 1H-13C NOESY aromatic, 3D HNHA, 2D 1H-13C HSQC, 3D CBCA(CO)NH, 3D HNCACB, 3D HNCO, 3D C(CO)NH, 3D H(CCO)NH, 3D HCCH-TOCSY, 3D 1H-15N NOESY
Spectrometer Information
Manufacturer
Model
Field Strength
Varian
INOVA
600.0
NMR Refinement
Method
simulated annealing
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
300
Conformers Submitted Total Number
20
Representative Model Choice Rationale
1
lowest energy
Computation: NMR Software
#
Classification
Software Name
Author
1
structure calculation version: 2.2
ARIA
Nilges, Rieping, Habeck, Bardiaux, Bernard and Malliavin
2
refinement version: 2.2
ARIA
Nilges, Rieping, Habeck, Bardiaux, Bernard and Malliavin
3
structure calculation version: 1.21
CNS
Brunger, Adams, Clore, Gros, Nilges and Read
4
refinement version: 1.21
CNS
Brunger, Adams, Clore, Gros, Nilges and Read
5
chemical shift assigment version: 2.1
CcpNmr_Analysis
CCPN
6
data analysis version: 2.1
CcpNmr_Analysis
CCPN
7
data analysis version: 1.1
DANGLE
CCPN
8
processing version: 7.4
NMRPipe
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax