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An Information Portal to 105339 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
2LQR
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    fewest violations  
     
    Spectrometer Info
    Field Strength 600.0
    Manufacturer Varian
    Model INOVA
    Field Strength 700.0
    Manufacturer Varian
    Model INOVA
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 50 mM TRIS-maleate, 150 mM NaCl, 2 mM DTT, 0.01 % sodium azide, 10 % D2O, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 150
    pH 6.0
    Pressure ambient
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing, torsion angle dynamics, matrix relaxation
    Details RASREC method has six stages that cycle between generating Rosetta fragments, producing low energy models, and biasing conformational search space towards low energy space
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 20
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aliphatic
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 3D 1H-13C NOESY aromatic
     
  •   Software and Computing Hide
    NMR Software
    Authors Guntert, Mumenthaler and Wuthrich
    Classification refinement
    Software Name CYANA
    Authors O.F. Lange and D. Baker
    Classification refinement
    Software Name ROSETTA RASREC
    Authors Bhattacharya and Montelione
    Classification data analysis
    Software Name PSVS
    Authors Guntert, Mumenthaler and Wuthrich
    Classification structure solution
    Software Name CYANA 2.2
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRDraw
    Authors Johnson, One Moon Scientific
    Classification chemical shift assignment
    Software Name NMRView
    Authors Johnson, One Moon Scientific
    Classification processing
    Software Name NMRView
    Authors Johnson, One Moon Scientific
    Classification peak picking
    Software Name NMRView