POP-OUT | CLOSE
 
SOLUTION NMR
Materials and Methods page
2LPF
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    median structure  
     
    Spectrometer Info
    Field Strength 600.0
    Manufacturer Varian
    Model VNMRS
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 1-1.5 mM [U-99% 13C; U-99% 15N] Phospholamban, 120 mM sodium chloride, 5 % D2O, 20 mM sodium phosphate, 100 mM dodecylphosphocholine, 95% H2O/5% D2O
    Solvent System 95% H2O/5% D2O
    Ionic Strength 0.120
    pH 6.0
    Pressure ambient
    Temperature 310
    IDs solution ID:2 condition ID:1
    Sample Contents 1-1.5 mM [U-99% 13C; U-99% 15N] Phospholamban, 120 mM sodium chloride, 5 % D2O, 20 mM sodium phosphate, 100 mM dodecylphosphocholine, 5.1 % acrylamide, 1.3 % bis-acrylamide, 95% H2O/5% D2O
    Solvent System 95% H2O/5% D2O
    Ionic Strength 0.120
    pH 6.0
    Pressure ambient
    Temperature 310
    IDs solution ID:3 condition ID:1
    Sample Contents 1-1.5 mM [U-99% 13C; U-99% 15N] Phospholamban, 120 mM sodium chloride, 5 % D2O, 20 mM sodium phosphate, 100 mM dodecylphosphocholine, 3.85 % acrylamide, 1.3 % bis-acrylamide, 1.25 % 2-(acrylamido)-2-methyl-1-propanesulfonic acid, 95% H2O/5% D2O
    Solvent System 95% H2O/5% D2O
    Ionic Strength 0.120
    pH 6.0
    Pressure ambient
    Temperature 310
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method molecular dynamics
    Details Restrained molecular dynamics simulations implementing RDC
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria median structure
    Conformers Calculated Total Number 16000
    Conformers Submitted Total Number 1
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:10 solution ID:1 conditons ID:1
    Type 3D H(CCO)NH
    IDs experiment ID:2 solution ID:2 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type 3D C(CO)NH
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:5 solution ID:2 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:6 solution ID:3 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:7 solution ID:1 conditons ID:1
    Type 2D HN(a/b-NCO-J)-TROSY
    IDs experiment ID:8 solution ID:2 conditons ID:1
    Type 2D HN(a/b-NC0-J)-TROSY
    IDs experiment ID:9 solution ID:1 conditons ID:1
    Type 3D C(CO)NH
     
  •   Software and Computing Hide
    NMR Software
    Authors Berendsens et. al.
    Classification refinement
    Software Name GROMACS
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe
    Authors Goddard
    Classification data analysis
    Software Name SPARKY